iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID	iRefIndex	PINA	Mentha
Post-translational Modifications (PTMs)
dbPAF	PHOSIDA
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.40e-20	72.8	158	197
ULD/UDP/UBQ/UBQ_PIM	7.90e-22	77.0	1	77

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 2    ededkleqlveMGFdreealqaLraannnleaAveyLldg 41
           e+++ +  +veMG++re++ +a++a++nn+e+AveyL++g
   Q: 158  EYNQTVLSMVEMGYPREQVERAMAASYNNPERAVEYLING 197
           67899999*****************************986 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg..vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           m +t+k+l++++f++e+ +++tv elK+ki +e+g  + +e+qkLIyaG iL Dd+t+ ++++++++++++++++++
   Q: 1    MIITIKNLQQQTFTIEFAPEKTVLELKKKIFEERGpeYVAEKQKLIYAGVILTDDRTVGSYNVDEKKFIVVMLTRDS 77
           89*********************************9999**********************************9986 PP

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MIITIKNLQQ QTFTIEFAPE KTVLELKKKI FEERGPEYVA EKQKLIYAGV ILTDDRTVGS 60
YNVDEKKFIV VMLTRDSSSS NRNQLSVKES NKLTSTDDSK QSMPCEEANH TNSPSSTNTE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGCCAGTCCA TGTGCGGTCA CACTGATGAC AAATCGTTTT TATCAAGCGA TATTGGGAAC 60
TAACTTTCGA GTTTGCATAT GTGTATGCAT ATGTATATTT AATTAAGTTT TGGTTTTGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0031593--F:polyubiquitin binding
GO:0000715--P:nucleotide-excision repair, DNA damage recognition
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0032434--P:regulation of proteasomal ubiquitin-dependent protein catabolic process

KEGG

dme:Dmel_CG1836

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000770	Aegilops tauschii	36.05	2.00e-20	92.40
IUUC-Aml-001515	Ailuropoda melanoleuca	40.00	3.00e-33	135.00
IUUC-Atr-002756	Amborella trichopoda	27.89	2.00e-33	135.00
IUUC-Apl-003371	Anas platyrhynchos	34.96	2.00e-46	179.00
IUUC-Aca-004704	Anolis carolinensis	36.90	6.00e-27	114.00
IUUC-Aly-006159	Arabidopsis lyrata	28.44	1.00e-40	159.00
IUUC-Ath-006674	Arabidopsis thaliana	32.65	6.00e-31	127.00
IUUC-Ago-007830	Ashbya gossypii	24.19	4.00e-20	91.70
IUUC-Acl-008212	Aspergillus clavatus	47.95	4.00e-14	71.60
IUUC-Afl-008605	Aspergillus flavus	31.09	9.00e-15	73.90
IUUC-Afu-008877	Aspergillus fumigatus	48.00	7.00e-15	73.90
IUUC-Ani-009460	Aspergillus nidulans	34.68	4.00e-18	84.70
IUUC-Aor-010032	Aspergillus oryzae	31.09	7.00e-15	73.90
IUUC-Ate-010458	Aspergillus terreus	30.17	1.00e-22	99.80
IUUC-Ame-011342	Astyanax mexicanus	35.21	7.00e-40	157.00
IUUC-Bgr-012056	Blumeria graminis	33.82	5.00e-22	97.80
IUUC-Bta-012377	Bos taurus	43.48	9.00e-39	153.00
IUUC-Bci-013933	Botrytis cinerea	47.95	1.00e-14	73.20
IUUC-Bdi-014718	Brachypodium distachyon	28.60	1.00e-36	146.00
IUUC-Bol-015272	Brassica oleracea	29.77	6.00e-41	160.00
IUUC-Bra-016970	Brassica rapa	29.60	6.00e-40	157.00
IUUC-Cel-018364	Caenorhabditis elegans	31.96	5.00e-22	97.40
IUUC-Cja-018946	Callithrix jacchus	40.47	2.00e-32	132.00
IUUC-Cfa-020683	Canis familiaris	42.77	1.00e-20	93.20
IUUC-Cpo-022145	Cavia porcellus	39.86	2.00e-34	138.00
IUUC-Cre-022810	Chlamydomonas reinhardtii	33.07	2.00e-24	105.00
IUUC-Csa-023714	Chlorocebus sabaeus	41.08	3.00e-21	95.50
IUUC-Cho-024814	Choloepus hoffmanni	71.43	2.00e-16	79.30
IUUC-Cin-025741	Ciona intestinalis	32.42	1.00e-28	119.00
IUUC-Csv-025823	Ciona savignyi	33.57	4.00e-28	117.00
IUUC-Cgl-026495	Colletotrichum gloeosporioides	45.21	4.00e-13	68.20
IUUC-Cne-027056	Cryptococcus neoformans	45.21	2.00e-10	59.30
IUUC-Cme-027260	Cyanidioschyzon merolae	27.91	2.00e-24	105.00
IUUC-Dre-028209	Danio rerio	36.84	1.00e-49	189.00
IUUC-Dno-030017	Dasypus novemcinctus	37.50	1.00e-30	126.00
IUUC-Dor-030358	Dipodomys ordii	47.97	3.00e-23	101.00
IUUC-Dse-031336	Dothistroma septosporum	48.61	4.00e-14	71.60
IUUC-Ete-032583	Echinops telfairi	67.31	5.00e-16	78.20
IUUC-Eca-033599	Equus caballus	37.32	9.00e-28	116.00
IUUC-Eeu-034721	Erinaceus europaeus	45.06	1.00e-19	89.40
IUUC-Fca-036051	Felis catus	42.47	8.00e-40	156.00
IUUC-Fal-037148	Ficedula albicollis	41.28	1.00e-37	149.00
IUUC-Fox-037960	Fusarium oxysporum	34.17	1.00e-24	106.00
IUUC-Fso-038107	Fusarium solani	34.17	4.00e-24	104.00
IUUC-Gmo-038528	Gadus morhua	33.66	2.00e-39	155.00
IUUC-Ggr-040116	Gaeumannomyces graminis	31.58	7.00e-13	67.40
IUUC-Gga-040544	Gallus gallus	41.75	3.00e-38	151.00
IUUC-Gac-042298	Gasterosteus aculeatus	33.58	1.00e-36	146.00
IUUC-Gma-044045	Glycine max	31.47	4.00e-43	167.00
IUUC-Ggo-045125	Gorilla gorilla	40.98	9.00e-21	94.00
IUUC-Hsa-046519	Homo sapiens	40.98	9.00e-21	94.00
IUUC-Hvu-047832	Hordeum vulgare	35.75	3.00e-20	92.00
IUUC-Itr-047875	Ictidomys tridecemlineatus	41.53	2.00e-43	169.00
IUUC-Lch-049719	Latimeria chalumnae	37.11	4.00e-61	227.00
IUUC-Lpe-050801	Leersia perrieri	29.10	7.00e-27	114.00
IUUC-Loc-051758	Lepisosteus oculatus	36.96	1.00e-35	143.00
IUUC-Lma-053328	Leptosphaeria maculans	46.75	3.00e-11	58.90
IUUC-Laf-054589	Loxodonta africana	39.67	1.00e-37	149.00
IUUC-Mcc-055860	Macaca mulatta	40.80	8.00e-38	150.00
IUUC-Meu-056459	Macropus eugenii	41.61	1.00e-39	156.00
IUUC-Mor-057287	Magnaporthe oryzae	45.33	2.00e-13	69.30
IUUC-Mpo-057609	Magnaporthe poae	46.58	9.00e-13	66.60
IUUC-Mtr-058239	Medicago truncatula	26.85	4.00e-37	147.00
IUUC-Mga-060060	Meleagris gallopavo	29.17	3.00e-03	35.00
IUUC-Mvi-060220	Microbotryum violaceum	52.86	7.00e-13	67.80
IUUC-Mmr-060819	Microcebus murinus	41.86	3.00e-42	164.00
IUUC-Mdo-062742	Monodelphis domestica	36.54	3.00e-59	221.00
IUUC-Mmu-063258	Mus musculus	41.84	1.00e-37	149.00
IUUC-Mac-064724	Musa acuminata	29.07	2.00e-38	152.00
IUUC-Mpu-066684	Mustela putorius furo	42.47	9.00e-39	153.00
IUUC-Mlu-067787	Myotis lucifugus	40.20	1.00e-38	152.00
IUUC-Nfi-068390	Neosartorya fischeri	31.21	9.00e-14	70.50
IUUC-Ncr-068685	Neurospora crassa	48.00	1.00e-15	76.60
IUUC-Nle-069655	Nomascus leucogenys	41.08	3.00e-21	95.50
IUUC-Opr-070234	Ochotona princeps	50.98	3.00e-08	52.00
IUUC-Ont-072626	Oreochromis niloticus	33.33	2.00e-24	105.00
IUUC-Oan-073572	Ornithorhynchus anatinus	37.67	4.00e-53	201.00
IUUC-Ocu-074831	Oryctolagus cuniculus	42.68	2.00e-18	85.90
IUUC-Oba-075392	Oryza barthii	30.51	1.00e-27	116.00
IUUC-Obr-076909	Oryza brachyantha	27.46	5.00e-36	144.00
IUUC-Ogl-077067	Oryza glaberrima	29.53	2.00e-40	158.00
IUUC-Ogu-078883	Oryza glumaepatula	30.51	9.00e-28	117.00
IUUC-Oin-079817	Oryza indica	30.17	9.00e-27	113.00
IUUC-Olo-080929	Oryza longistaminata	30.17	4.00e-27	114.00
IUUC-Ome-081866	Oryza meridionalis	30.51	9.00e-28	117.00
IUUC-Oni-083092	Oryza nivara	30.17	9.00e-27	113.00
IUUC-Opu-083963	Oryza punctata	31.79	2.00e-33	135.00
IUUC-Oru-084816	Oryza rufipogon	30.17	9.00e-27	113.00
IUUC-Osa-086112	Oryza sativa	30.17	9.00e-27	113.00
IUUC-Ola-086540	Oryzias latipes	44.00	8.00e-38	150.00
IUUC-Olu-087843	Ostreococcus lucimarinus	29.67	9.00e-29	120.00
IUUC-Oga-089075	Otolemur garnettii	38.93	7.00e-38	150.00
IUUC-Oar-090387	Ovis aries	43.00	5.00e-36	144.00
IUUC-Ptr-091165	Pan troglodytes	40.98	1.00e-20	93.20
IUUC-Pan-092140	Papio anubis	40.80	7.00e-38	150.00
IUUC-Psi-093477	Pelodiscus sinensis	67.31	4.00e-16	78.20
IUUC-Pno-095064	Phaeosphaeria nodorum	49.33	8.00e-14	70.50
IUUC-Ppa-095654	Physcomitrella patens	30.56	8.00e-27	113.00
IUUC-Pfo-096607	Poecilia formosa	38.01	6.00e-35	140.00
IUUC-Pab-097738	Pongo abelii	38.46	4.00e-31	127.00
IUUC-Pop-099642	Populus trichocarpa	28.57	2.00e-39	155.00
IUUC-Ppe-101830	Prunus persica	28.27	2.00e-26	112.00
IUUC-Pva-102412	Pteropus vampyrus	39.60	2.00e-37	148.00
IUUC-Pgr-103618	Puccinia graminis	57.14	3.00e-13	68.90
IUUC-Ptt-103717	Puccinia triticina	35.63	9.00e-22	97.10
IUUC-Pte-104303	Pyrenophora teres	32.56	1.00e-13	70.10
IUUC-Pyt-104580	Pyrenophora triticirepentis	52.78	1.00e-13	70.10
IUUC-Rno-104844	Rattus norvegicus	41.16	4.00e-37	148.00
IUUC-Sce-106214	Saccharomyces cerevisiae	56.25	3.00e-12	65.50
IUUC-Sha-106918	Sarcophilus harrisii	36.52	1.00e-47	183.00
IUUC-Sja-107851	Schizosaccharomyces japonicus	34.17	1.00e-50	192.00
IUUC-Spo-108298	Schizosaccharomyces pombe	35.02	7.00e-34	137.00
IUUC-Ssl-108382	Sclerotinia sclerotiorum	33.49	1.00e-19	90.10
IUUC-Smo-109129	Selaginella moellendorffii	31.68	5.00e-19	87.80
IUUC-Sit-109813	Setaria italica	27.73	4.00e-34	137.00
IUUC-Sly-111349	Solanum lycopersicum	28.31	8.00e-39	153.00
IUUC-Stu-112054	Solanum tuberosum	28.02	2.00e-38	152.00
IUUC-Sar-112925	Sorex araneus	46.90	1.00e-16	80.10
IUUC-Sbi-114459	Sorghum bicolor	28.12	9.00e-36	143.00
IUUC-Sre-114894	Sporisorium reilianum	48.48	1.00e-11	63.50
IUUC-Ssc-115460	Sus scrofa	39.93	1.00e-39	155.00
IUUC-Tgu-116918	Taeniopygia guttata	37.44	5.00e-55	207.00
IUUC-Tru-118651	Takifugu rubripes	39.15	2.00e-41	162.00
IUUC-Tsy-118836	Tarsius syrichta	67.31	4.00e-16	78.20
IUUC-Tni-120486	Tetraodon nigroviridis	36.60	2.00e-53	201.00
IUUC-Tca-121594	Theobroma cacao	29.12	1.00e-37	149.00
IUUC-Tre-121911	Trichoderma reesei	25.06	2.00e-23	102.00
IUUC-Tvi-122617	Trichoderma virens	42.67	2.00e-13	69.30
IUUC-Tae-125230	Triticum aestivum	31.28	1.00e-17	83.20
IUUC-Tur-126610	Triticum urartu	36.05	1.00e-20	94.40
IUUC-Tme-127092	Tuber melanosporum	33.66	7.00e-25	107.00
IUUC-Tbe-127493	Tupaia belangeri	71.43	3.00e-16	78.60
IUUC-Ttr-129232	Tursiops truncatus	47.97	1.00e-23	102.00
IUUC-Uma-129484	Ustilago maydis	55.10	2.00e-11	63.20
IUUC-Vda-129946	Verticillium dahliae	32.18	7.00e-14	70.90
IUUC-Vpa-130357	Vicugna pacos	46.05	2.00e-18	85.90
IUUC-Vvi-131039	Vitis vinifera	35.20	4.00e-25	107.00
IUUC-Xtr-132679	Xenopus tropicalis	34.40	1.00e-25	109.00
IUUC-Xma-133647	Xiphophorus maculatus	47.33	2.00e-24	105.00
IUUC-Zma-135929	Zea mays	28.28	4.00e-37	147.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence