iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107851

Ensembl Protein ID

EEB05916

UniProt Accession

B6JX15; B6JX15_SCHJY

Genbank Protein ID

EEB05916.1

Protein Name

Rad23 Rhp23

Genbank Nucleotide ID

KE651166

Gene Name

SJAG_00941

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_00941	EEB05916	EEB05916

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	4.70e-23	78.7	144	182
ULD/UDP/UBQ/UBQ_PIM	8.70e-27	90.9	1	76

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLldg 41
           ++ +++++veMG++r+++  a+raa+nn+++AveyLl+g
   Q: 144  RNAVIDNMVEMGYERSQVELAMRAAFNNPDRAVEYLLNG 182
           6778*********************************86 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefel.evseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           m+lt+k+l++++f + +v++++tv e+K+ki++++g+++e+qkLIy+G+iL Dd+t++e++ik++++++++v++++
   Q: 1    MQLTFKNLQQQKFVVpDVDPKTTVLEVKQKIKEQQGYEVERQKLIYSGRILADDKTVEEYDIKEKDFIVCMVSRAP 76
           99**********9999*********************************************************986 PP

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

MQLTFKNLQQ QKFVVPDVDP KTTVLEVKQK IKEQQGYEVE RQKLIYSGRI LADDKTVEEY 60
DIKEKDFIVC MVSRAPASKV KTEQKTEEKK QSTTESTPLN TTSTSPKTPA PESVPEQTQP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTGACACAA CTATCATCCG CAACATCTTA TCGCATTTGT TATATAAAAT GAAACGTTTG 60
TTTCGCGCGT TACAGGCCAG CCTATTTTAT TGACTTACAC CGCCTTCTCA CCGCACATCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005829--C:cytosol
GO:0005635--C:nuclear envelope
GO:0000111--C:nucleotide-excision repair factor 2 complex
GO:0000502--C:proteasome complex
GO:0003684--F:damaged DNA binding
GO:0000224--F:peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity
GO:0042177--P:negative regulation of protein catabolic process
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0006289--P:nucleotide-excision repair
GO:0006517--P:protein deglycosylation
GO:0016567--P:protein ubiquitination
GO:0030433--P:ubiquitin-dependent ERAD pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000770	Aegilops tauschii	43.03	6.00e-37	146.00
IUUC-Aml-001195	Ailuropoda melanoleuca	47.83	2.00e-17	81.60
IUUC-Atr-002756	Amborella trichopoda	36.62	2.00e-46	177.00
IUUC-Apl-003371	Anas platyrhynchos	41.34	9.00e-30	122.00
IUUC-Aca-004704	Anolis carolinensis	33.50	5.00e-22	96.30
IUUC-Aly-005486	Arabidopsis lyrata	35.14	7.00e-42	162.00
IUUC-Ath-006688	Arabidopsis thaliana	34.73	9.00e-39	152.00
IUUC-Ago-007830	Ashbya gossypii	33.51	9.00e-25	105.00
IUUC-Acl-008212	Aspergillus clavatus	53.06	6.00e-44	169.00
IUUC-Afl-008605	Aspergillus flavus	47.01	1.00e-63	234.00
IUUC-Afu-008877	Aspergillus fumigatus	51.85	1.00e-43	168.00
IUUC-Ani-009460	Aspergillus nidulans	49.60	9.00e-66	241.00
IUUC-Aor-010032	Aspergillus oryzae	46.52	2.00e-64	237.00
IUUC-Ate-010458	Aspergillus terreus	54.70	2.00e-46	177.00
IUUC-Ame-011107	Astyanax mexicanus	44.09	2.00e-14	71.60
IUUC-Bgr-012056	Blumeria graminis	38.62	4.00e-31	126.00
IUUC-Bta-012377	Bos taurus	33.09	4.00e-42	163.00
IUUC-Bci-013933	Botrytis cinerea	38.35	4.00e-33	133.00
IUUC-Bdi-014718	Brachypodium distachyon	32.45	9.00e-42	162.00
IUUC-Bol-016493	Brassica oleracea	39.59	6.00e-35	139.00
IUUC-Bra-017582	Brassica rapa	39.51	7.00e-35	139.00
IUUC-Cel-018364	Caenorhabditis elegans	29.09	3.00e-23	100.00
IUUC-Cja-018946	Callithrix jacchus	32.84	7.00e-39	152.00
IUUC-Cfa-020577	Canis familiaris	33.33	7.00e-43	165.00
IUUC-Cpo-021850	Cavia porcellus	34.17	2.00e-45	174.00
IUUC-Cre-022810	Chlamydomonas reinhardtii	41.13	1.00e-21	95.10
IUUC-Csa-023183	Chlorocebus sabaeus	36.86	4.00e-32	129.00
IUUC-Cho-024814	Choloepus hoffmanni	47.83	9.00e-18	82.40
IUUC-Cin-025741	Ciona intestinalis	32.33	1.00e-25	108.00
IUUC-Csv-025823	Ciona savignyi	34.95	1.00e-23	100.00
IUUC-Cgl-026495	Colletotrichum gloeosporioides	42.39	3.00e-34	136.00
IUUC-Cne-027056	Cryptococcus neoformans	48.67	6.00e-19	86.30
IUUC-Cme-027260	Cyanidioschyzon merolae	26.08	2.00e-29	121.00
IUUC-Dre-028369	Danio rerio	47.29	1.00e-25	108.00
IUUC-Dno-030017	Dasypus novemcinctus	32.72	1.00e-38	151.00
IUUC-Dor-030358	Dipodomys ordii	37.65	9.00e-33	132.00
IUUC-Dse-031336	Dothistroma septosporum	65.26	2.00e-32	131.00
IUUC-Dme-032027	Drosophila melanogaster	33.94	8.00e-56	208.00
IUUC-Ete-032583	Echinops telfairi	42.86	3.00e-17	80.90
IUUC-Eca-034243	Equus caballus	42.17	2.00e-30	124.00
IUUC-Eeu-034721	Erinaceus europaeus	57.14	2.00e-11	61.20
IUUC-Fca-035679	Felis catus	41.77	5.00e-30	123.00
IUUC-Fal-037148	Ficedula albicollis	41.50	2.00e-29	121.00
IUUC-Fox-037960	Fusarium oxysporum	41.50	7.00e-35	139.00
IUUC-Fso-038107	Fusarium solani	42.50	1.00e-36	145.00
IUUC-Gmo-038528	Gadus morhua	35.33	6.00e-49	185.00
IUUC-Ggr-040116	Gaeumannomyces graminis	59.60	1.00e-29	122.00
IUUC-Gga-040544	Gallus gallus	47.86	1.00e-18	85.10
IUUC-Gac-042298	Gasterosteus aculeatus	35.77	5.00e-45	172.00
IUUC-Gma-044370	Glycine max	42.80	3.00e-40	157.00
IUUC-Ggo-045084	Gorilla gorilla	36.86	6.00e-32	129.00
IUUC-Hsa-046614	Homo sapiens	36.86	4.00e-32	129.00
IUUC-Hvu-047832	Hordeum vulgare	42.21	8.00e-37	145.00
IUUC-Itr-047875	Ictidomys tridecemlineatus	34.89	9.00e-47	178.00
IUUC-Kpa-049314	Komagataella pastoris	38.98	7.00e-57	212.00
IUUC-Lch-050563	Latimeria chalumnae	35.11	3.00e-41	160.00
IUUC-Lpe-051087	Leersia perrieri	40.24	4.00e-36	143.00
IUUC-Loc-051758	Lepisosteus oculatus	37.22	4.00e-23	100.00
IUUC-Lma-053328	Leptosphaeria maculans	54.67	1.00e-17	78.60
IUUC-Laf-054589	Loxodonta africana	35.50	7.00e-25	105.00
IUUC-Mcc-055860	Macaca mulatta	36.86	4.00e-32	129.00
IUUC-Meu-056459	Macropus eugenii	39.27	1.00e-33	134.00
IUUC-Mor-057287	Magnaporthe oryzae	41.00	5.00e-33	133.00
IUUC-Mpo-057609	Magnaporthe poae	60.00	1.00e-28	117.00
IUUC-Mtr-058239	Medicago truncatula	34.10	1.00e-45	175.00
IUUC-Mla-058961	Melampsora laricipopulina	47.29	3.00e-29	120.00
IUUC-Mga-060060	Meleagris gallopavo	56.60	1.30e-01	28.50
IUUC-Mvi-060220	Microbotryum violaceum	46.67	5.00e-24	103.00
IUUC-Mmr-060819	Microcebus murinus	34.47	9.00e-46	175.00
IUUC-Mdo-062742	Monodelphis domestica	35.53	4.00e-50	189.00
IUUC-Mmu-063929	Mus musculus	33.58	2.00e-45	174.00
IUUC-Mac-065029	Musa acuminata	32.51	9.00e-41	158.00
IUUC-Mpu-066684	Mustela putorius furo	33.82	4.00e-43	166.00
IUUC-Mlu-067999	Myotis lucifugus	41.04	1.00e-29	121.00
IUUC-Nfi-068390	Neosartorya fischeri	52.26	1.00e-43	167.00
IUUC-Ncr-068685	Neurospora crassa	49.19	5.00e-42	162.00
IUUC-Nle-069655	Nomascus leucogenys	40.80	1.00e-28	118.00
IUUC-Opr-070234	Ochotona princeps	47.06	2.00e-08	51.60
IUUC-Ont-072484	Oreochromis niloticus	36.73	2.00e-51	194.00
IUUC-Oan-073572	Ornithorhynchus anatinus	33.51	2.00e-22	97.40
IUUC-Ocu-073793	Oryctolagus cuniculus	34.60	6.00e-31	125.00
IUUC-Oba-075951	Oryza barthii	34.57	2.00e-40	158.00
IUUC-Obr-076660	Oryza brachyantha	34.82	4.00e-45	173.00
IUUC-Ogl-077152	Oryza glaberrima	34.57	2.00e-40	158.00
IUUC-Ogu-078896	Oryza glumaepatula	34.81	4.00e-41	159.00
IUUC-Oin-079817	Oryza indica	40.16	5.00e-36	143.00
IUUC-Olo-080559	Oryza longistaminata	35.51	2.00e-49	187.00
IUUC-Ome-081866	Oryza meridionalis	40.16	2.00e-36	144.00
IUUC-Oni-083092	Oryza nivara	40.16	5.00e-36	143.00
IUUC-Opu-083756	Oryza punctata	40.98	3.00e-37	147.00
IUUC-Oru-084816	Oryza rufipogon	40.16	5.00e-36	143.00
IUUC-Osa-086112	Oryza sativa	40.16	5.00e-36	143.00
IUUC-Ola-086540	Oryzias latipes	38.82	8.00e-18	82.40
IUUC-Olu-087843	Ostreococcus lucimarinus	35.36	3.00e-42	163.00
IUUC-Oga-089075	Otolemur garnettii	33.00	2.00e-41	160.00
IUUC-Oar-090387	Ovis aries	32.35	5.00e-41	159.00
IUUC-Ptr-090912	Pan troglodytes	36.86	6.00e-32	129.00
IUUC-Pan-092140	Papio anubis	36.86	6.00e-32	129.00
IUUC-Psi-093477	Pelodiscus sinensis	43.56	4.00e-14	70.10
IUUC-Pno-095064	Phaeosphaeria nodorum	45.36	9.00e-45	172.00
IUUC-Ppa-095964	Physcomitrella patens	52.80	6.00e-30	122.00
IUUC-Pfo-096607	Poecilia formosa	36.20	2.00e-47	181.00
IUUC-Pab-097738	Pongo abelii	33.51	1.00e-39	155.00
IUUC-Pop-099416	Populus trichocarpa	33.94	3.00e-47	180.00
IUUC-Pca-100348	Procavia capensis	33.99	2.00e-43	167.00
IUUC-Ppe-101830	Prunus persica	36.73	4.00e-42	163.00
IUUC-Pva-102137	Pteropus vampyrus	42.17	5.00e-31	126.00
IUUC-Pgr-103618	Puccinia graminis	35.58	8.00e-29	119.00
IUUC-Ptt-103717	Puccinia triticina	40.81	2.00e-56	210.00
IUUC-Pte-104303	Pyrenophora teres	46.61	2.00e-55	207.00
IUUC-Pyt-104580	Pyrenophora triticirepentis	44.39	1.00e-51	194.00
IUUC-Rno-105569	Rattus norvegicus	37.90	6.00e-32	129.00
IUUC-Sce-106214	Saccharomyces cerevisiae	41.84	1.00e-24	105.00
IUUC-Sha-106918	Sarcophilus harrisii	35.19	1.00e-40	158.00
IUUC-Spo-108298	Schizosaccharomyces pombe	57.65	2.00e-110	389.00
IUUC-Ssl-108382	Sclerotinia sclerotiorum	40.80	8.00e-33	132.00
IUUC-Smo-109518	Selaginella moellendorffii	36.20	5.00e-35	139.00
IUUC-Sit-109813	Setaria italica	35.35	7.00e-47	179.00
IUUC-Sly-111480	Solanum lycopersicum	35.78	3.00e-50	190.00
IUUC-Stu-112027	Solanum tuberosum	36.36	1.00e-50	191.00
IUUC-Sar-112925	Sorex araneus	47.83	1.00e-17	81.60
IUUC-Sbi-114459	Sorghum bicolor	34.76	1.00e-45	174.00
IUUC-Sre-114894	Sporisorium reilianum	47.22	3.00e-13	67.40
IUUC-Ssc-116329	Sus scrofa	42.17	5.00e-31	126.00
IUUC-Tgu-116918	Taeniopygia guttata	41.50	2.00e-29	121.00
IUUC-Tru-117920	Takifugu rubripes	41.84	5.00e-42	163.00
IUUC-Tsy-118836	Tarsius syrichta	42.86	5.00e-17	80.10
IUUC-Tni-120493	Tetraodon nigroviridis	36.08	6.00e-52	195.00
IUUC-Tca-121594	Theobroma cacao	49.58	2.00e-26	111.00
IUUC-Tre-121911	Trichoderma reesei	41.91	9.00e-52	194.00
IUUC-Tvi-122617	Trichoderma virens	42.78	1.00e-34	138.00
IUUC-Tae-125346	Triticum aestivum	34.55	1.00e-41	161.00
IUUC-Tur-126610	Triticum urartu	43.03	2.00e-37	148.00
IUUC-Tme-127092	Tuber melanosporum	47.51	4.00e-71	259.00
IUUC-Tbe-127493	Tupaia belangeri	47.83	2.00e-17	81.60
IUUC-Ttr-128464	Tursiops truncatus	42.17	1.00e-30	125.00
IUUC-Uma-129484	Ustilago maydis	60.78	3.00e-14	71.20
IUUC-Vda-129946	Verticillium dahliae	40.32	4.00e-34	136.00
IUUC-Vpa-130357	Vicugna pacos	59.18	3.00e-12	63.90
IUUC-Vvi-131039	Vitis vinifera	43.10	2.00e-40	157.00
IUUC-Xtr-132679	Xenopus tropicalis	48.05	2.00e-14	71.60
IUUC-Xma-133647	Xiphophorus maculatus	41.70	6.00e-35	139.00
IUUC-Yli-134615	Yarrowia lipolytica	46.64	5.00e-45	172.00
IUUC-Zma-135929	Zea mays	35.62	6.00e-48	182.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence