iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ame-010910

Ensembl Protein ID

ENSAMXP00000021418.1

UniProt Accession

W5LNK6; W5LNK6_ASTMX

Genbank Protein ID

ENSAMXP00000021418

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

APWO01079741

Gene Name

LDB1 (1 of many)

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMXG00000020796.1	ENSAMXT00000021418.1	ENSAMXP00000021418.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/U-box	60.05	2.00e-119	426.00	IUUC-Dme-031667

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Astyanax mexicanus

Protein Sequence
(Fasta)

MSVGGCACPG CSSKSFKLYS PKEPPNGSAF PPFHPGTMLD RDVGPTPMYP PTYLEPGIGR 60
HTPYGNQTDY RIFELNKRLQ NWTEECDNLW WDAFTTEFFE DDAMLTITFC LEDGPKRYTI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACACTAATA AGTGTGAGCG TACAGTCAAG GCAGCTTCAG GACTGCAACT CACTCTCTTT 60
CTCCCTCTCT CTCTCTCTCT CTCTCTGTCT CAATCTGTCT ATCTCTCTCT CTCTCTCCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR030167--LDB1
IPR029005--LIM-bd/SEUSS

Gene Ontology

GO:0005634--C:nucleus
GO:0000989--F:transcription factor activity, transcription factor binding
GO:0006357--P:regulation of transcription from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000177	Aegilops tauschii	25.30	1.00e-04	42.40
IUUC-Aml-002031	Ailuropoda melanoleuca	93.24	0.00e+00	712.00
IUUC-Atr-003083	Amborella trichopoda	25.20	6.00e-04	40.00
IUUC-Apl-004210	Anas platyrhynchos	94.22	1.00e-167	582.00
IUUC-Aca-005241	Anolis carolinensis	95.63	0.00e+00	733.00
IUUC-Aly-006204	Arabidopsis lyrata	25.00	2.00e-06	47.80
IUUC-Ath-007339	Arabidopsis thaliana	25.00	2.00e-06	48.50
IUUC-Acl-008255	Aspergillus clavatus	20.18	5.00e-06	46.60
IUUC-Bgr-012180	Blumeria graminis	22.61	2.00e-06	48.10
IUUC-Bta-012596	Bos taurus	73.11	4.00e-150	523.00
IUUC-Bci-013927	Botrytis cinerea	26.03	1.00e-06	48.50
IUUC-Bol-015721	Brassica oleracea	25.53	6.00e-07	49.70
IUUC-Bra-017183	Brassica rapa	25.53	6.00e-07	49.70
IUUC-Cel-018189	Caenorhabditis elegans	33.62	6.00e-30	125.00
IUUC-Cja-019586	Callithrix jacchus	74.29	1.00e-152	532.00
IUUC-Cfa-021188	Canis familiaris	93.24	0.00e+00	711.00
IUUC-Cpo-022350	Cavia porcellus	94.29	0.00e+00	705.00
IUUC-Csa-023816	Chlorocebus sabaeus	94.42	0.00e+00	724.00
IUUC-Cho-024958	Choloepus hoffmanni	60.73	6.00e-64	238.00
IUUC-Cin-025721	Ciona intestinalis	48.75	8.00e-85	306.00
IUUC-Csv-026065	Ciona savignyi	50.15	1.00e-88	319.00
IUUC-Dre-027356	Danio rerio	68.01	1.00e-143	503.00
IUUC-Dno-029918	Dasypus novemcinctus	94.55	0.00e+00	691.00
IUUC-Dor-030634	Dipodomys ordii	94.67	0.00e+00	654.00
IUUC-Dse-031245	Dothistroma septosporum	24.00	5.00e-04	40.00
IUUC-Dme-031667	Drosophila melanogaster	62.21	2.00e-117	416.00
IUUC-Ete-032246	Echinops telfairi	72.27	2.00e-152	531.00
IUUC-Eca-034015	Equus caballus	73.46	1.00e-152	532.00
IUUC-Eeu-034902	Erinaceus europaeus	94.67	0.00e+00	654.00
IUUC-Fca-035903	Felis catus	93.83	0.00e+00	707.00
IUUC-Fal-037407	Ficedula albicollis	75.63	3.00e-147	514.00
IUUC-Gmo-039466	Gadus morhua	94.51	0.00e+00	741.00
IUUC-Ggr-040030	Gaeumannomyces graminis	20.97	4.00e-03	37.40
IUUC-Gga-040214	Gallus gallus	95.15	0.00e+00	724.00
IUUC-Gac-042214	Gasterosteus aculeatus	93.60	0.00e+00	744.00
IUUC-Gma-042794	Glycine max	23.16	2.00e-07	51.20
IUUC-Ggo-044988	Gorilla gorilla	73.74	6.00e-153	533.00
IUUC-Hsa-046092	Homo sapiens	73.18	5.00e-150	523.00
IUUC-Itr-047934	Ictidomys tridecemlineatus	94.66	0.00e+00	724.00
IUUC-Lch-049895	Latimeria chalumnae	79.03	3.00e-94	337.00
IUUC-Lpe-050806	Leersia perrieri	25.35	2.00e-06	48.10
IUUC-Loc-052845	Lepisosteus oculatus	96.60	0.00e+00	741.00
IUUC-Lma-053090	Leptosphaeria maculans	24.22	4.00e-04	40.40
IUUC-Laf-054538	Loxodonta africana	91.01	8.00e-174	602.00
IUUC-Mcc-055116	Macaca mulatta	80.26	4.00e-115	407.00
IUUC-Meu-056777	Macropus eugenii	89.33	2.00e-173	601.00
IUUC-Mpo-057376	Magnaporthe poae	22.68	5.00e-04	40.40
IUUC-Mtr-058142	Medicago truncatula	23.16	2.00e-07	51.60
IUUC-Mga-059716	Meleagris gallopavo	75.07	3.00e-146	511.00
IUUC-Mmr-060649	Microcebus murinus	73.18	2.00e-151	528.00
IUUC-Mdo-062535	Monodelphis domestica	73.74	3.00e-151	528.00
IUUC-Mmu-064036	Mus musculus	72.91	1.00e-149	522.00
IUUC-Mac-065338	Musa acuminata	24.26	4.00e-06	47.00
IUUC-Mpu-065719	Mustela putorius furo	94.66	0.00e+00	724.00
IUUC-Mlu-067219	Myotis lucifugus	92.61	0.00e+00	696.00
IUUC-Ncr-068691	Neurospora crassa	22.73	4.00e-05	43.90
IUUC-Nle-068983	Nomascus leucogenys	74.29	4.00e-153	534.00
IUUC-Opr-070467	Ochotona princeps	94.67	0.00e+00	654.00
IUUC-Ont-071566	Oreochromis niloticus	95.32	0.00e+00	751.00
IUUC-Oan-073368	Ornithorhynchus anatinus	94.40	0.00e+00	649.00
IUUC-Ocu-074854	Oryctolagus cuniculus	74.30	4.00e-154	537.00
IUUC-Ome-081687	Oryza meridionalis	23.68	6.00e-04	39.30
IUUC-Ola-086364	Oryzias latipes	95.82	0.00e+00	748.00
IUUC-Oga-088235	Otolemur garnettii	72.35	3.00e-150	524.00
IUUC-Oar-089547	Ovis aries	93.24	0.00e+00	712.00
IUUC-Ptr-091423	Pan troglodytes	73.74	6.00e-153	533.00
IUUC-Pan-092378	Papio anubis	94.40	0.00e+00	654.00
IUUC-Psi-093638	Pelodiscus sinensis	73.74	1.00e-148	519.00
IUUC-Pma-094384	Petromyzon marinus	60.11	1.00e-43	169.00
IUUC-Pno-095027	Phaeosphaeria nodorum	23.26	9.00e-04	38.90
IUUC-Pfo-096031	Poecilia formosa	93.33	0.00e+00	690.00
IUUC-Pab-097886	Pongo abelii	74.29	4.00e-153	534.00
IUUC-Pop-099430	Populus trichocarpa	24.85	2.00e-06	48.50
IUUC-Pca-101138	Procavia capensis	94.67	0.00e+00	654.00
IUUC-Ppe-101293	Prunus persica	27.12	7.00e-07	49.30
IUUC-Pva-103215	Pteropus vampyrus	73.46	8.00e-153	533.00
IUUC-Pte-104238	Pyrenophora teres	25.64	2.00e-03	37.70
IUUC-Rno-105968	Rattus norvegicus	73.18	1.00e-149	522.00
IUUC-Sha-107595	Sarcophilus harrisii	94.21	0.00e+00	689.00
IUUC-Ssl-108527	Sclerotinia sclerotiorum	24.14	3.00e-06	47.00
IUUC-Smo-109552	Selaginella moellendorffii	19.34	2.00e-03	37.70
IUUC-Sly-110873	Solanum lycopersicum	25.47	2.00e-06	48.50
IUUC-Stu-112586	Solanum tuberosum	20.10	6.00e-03	36.60
IUUC-Sar-113076	Sorex araneus	72.37	3.00e-99	355.00
IUUC-Sre-115143	Sporisorium reilianum	18.93	1.00e-03	38.90
IUUC-Ssc-115755	Sus scrofa	94.13	0.00e+00	645.00
IUUC-Tgu-117326	Taeniopygia guttata	75.35	1.00e-146	512.00
IUUC-Tru-117858	Takifugu rubripes	69.92	2.00e-150	525.00
IUUC-Tsy-119296	Tarsius syrichta	67.88	2.00e-136	478.00
IUUC-Tni-119822	Tetraodon nigroviridis	92.94	7.00e-180	622.00
IUUC-Tca-120935	Theobroma cacao	24.53	4.00e-07	50.40
IUUC-Tbe-127366	Tupaia belangeri	93.07	0.00e+00	629.00
IUUC-Ttr-128484	Tursiops truncatus	74.16	6.00e-141	493.00
IUUC-Vpa-130304	Vicugna pacos	79.82	3.00e-114	404.00
IUUC-Vvi-131560	Vitis vinifera	25.41	1.00e-06	48.50
IUUC-Xtr-132062	Xenopus tropicalis	95.73	0.00e+00	654.00
IUUC-Xma-134288	Xiphophorus maculatus	95.87	0.00e+00	771.00
IUUC-Yli-134374	Yarrowia lipolytica	19.47	7.00e-06	45.40
IUUC-Zma-135310	Zea mays	23.16	9.00e-05	42.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence