iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099908

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000338

Gene Name

POPTRDRAFT_798492; POPTR_0002s03870g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s03870	POPTR_0002s03870.1	POPTR_0002s03870.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	9.30e-32	110.0	236	308

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+Cp+slelM dPv+++sG+tydr sI+kwl++g + cP trq+l++++l+Pn+t++++i +wceen++
   Q: 236  IPPYFRCPLSLELMLDPVIVASGQTYDRVSIQKWLDHGLTFCPRTRQTLSHTNLIPNYTVKAMIANWCEENNV 308
           8*********************************************************************986 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

METSSVRCLI NSISRFMHLV SCQTKKYMPI QKDYEIMVIM LKHLKPVLDE VDDYNISSDE 60
ILCRECEELD VAVNEAREFM EKWCPQMSRI CSVQQSEALL KKIQSSALEI CQVLCRLLQG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAACGT CATCTGTAAG ATGTCTTATC AACAGTATTT CTCGATTCAT GCATCTCGTT 60
TCATGTCAGA CAAAGAAGTA TATGCCTATT CAAAAGGATT ACGAGATCAT GGTTATAATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pop:POPTR_0002s03870g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002809	Amborella trichopoda	40.31	4.00e-133	468.00
IUUC-Acl-008113	Aspergillus clavatus	31.33	4.00e-19	89.40
IUUC-Ani-009476	Aspergillus nidulans	30.47	2.00e-18	86.70
IUUC-Ggr-039908	Gaeumannomyces graminis	34.02	8.00e-18	84.70
IUUC-Mpo-057354	Magnaporthe poae	34.02	8.00e-18	84.70
IUUC-Ppe-101535	Prunus persica	65.06	0.00e+00	866.00
IUUC-Pyt-104569	Pyrenophora triticirepentis	31.07	7.00e-16	78.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence