iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cne-026793

Ensembl Protein ID

AAW43240

UniProt Accession

Q5KHR9; Q55UM5; Q5KHR9_CRYNJ

Genbank Protein ID

AAW43240.1

Protein Name

RNA processing-related protein, putative

Genbank Nucleotide ID

AE017344

Gene Name

CND05530

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CND05530	AAW43240	AAW43240

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.20e-25	84.9	348	381
UBD/Beta-Prp	5.00e-51	172.0	173	402

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           gH  ++ +++f ++   +++Gs+D t+++WDlr 
   Q: 348  GHVKEILAMDFaPNgYQIATGSGDDTVRIWDLRA 381
           79999*******77688**************986 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheae........vtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlsls 101
           ++ +++ + fsp++++++t+s++g +k+wd+ + + +++  gh+++         ++v  s+++  ++tg+  + +k+w+ls  k+++tl+gh+++v  l+
   Q: 173  DDRPLSTIRFSPSSQYVLTTSWTGDTKLWDLPNLNPISTKRGHTEKvggaawhpFATVGASEEAVNFATGGGEGDVKLWSLSGEKPLSTLSGHTSRVGRLA 273
           5678999***************************************555555555555555555589999999**************************** PP
   S: 102  fspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldg 202
           f+psg +l+s++ d t r+wd+e+ ++l  +++gh++ v  +  ++dg l++sG+ D + r+Wdl+tg+    l g h + +  ++f +ng ++++gs d 
   Q: 274  FHPSGAYLASAGFDGTWRLWDVESSKELM-IQEGHSKEVYALGCQDDGALIASGGFDAIGRVWDLRTGRTAMVLDG-HVKEILAMDFAPNGYQIATGSGDD 372
           *****************************.*********************************************9.************************ PP
   S: 203  tvklwdlqtgecvrtlnghtdnvksvrfsp 232
           tv++wdl++ ++ ++  +h++ v +v+f++
   Q: 373  TVRIWDLRALKTQYIIPAHKSSVADVKFFR 402
           ***************************985 PP

Organism

Cryptococcus neoformans

Protein Sequence
(Fasta)

MDLDDLITDN TYQLGGIDDE RERAQNAAII EELERKKRLR KLAVPTDDKK VRERLRAYGE 60
PITLFGEGPG DRRDRLKYVQ EQIEQAKGEG GMVIDESEES SDEDEEGEFY TEGADDLLEA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCCGGCACA CCGCGATGGA CTTGGACGAC CTCAGTAAGT ACAGCCCACA CGGCCACAGC 60
TCACCCCGCG CAGTCACAGA CAACACCTAC CAGCTCGGCG GCATCGACGA CGAGCGGGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR014906--PRP4-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08799--PRP4
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00500--SFM
SM00320--WD40

Gene Ontology

GO:0046540--C:U4/U6 x U5 tri-snRNP complex
GO:0030621--F:U4 snRNA binding
GO:0017070--F:U6 snRNA binding
GO:0000398--P:mRNA splicing, via spliceosome

KEGG

cne:CND05530

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000498	Aegilops tauschii	36.61	1.00e-77	281.00
IUUC-Aml-001737	Ailuropoda melanoleuca	40.82	2.00e-108	384.00
IUUC-Atr-002828	Amborella trichopoda	37.45	1.00e-87	315.00
IUUC-Apl-003723	Anas platyrhynchos	41.53	3.00e-110	390.00
IUUC-Aca-004972	Anolis carolinensis	40.91	9.00e-109	385.00
IUUC-Aly-006531	Arabidopsis lyrata	36.03	1.00e-73	268.00
IUUC-Ath-007367	Arabidopsis thaliana	37.80	1.00e-85	308.00
IUUC-Ago-007893	Ashbya gossypii	33.74	4.00e-57	213.00
IUUC-Acl-008236	Aspergillus clavatus	44.80	1.00e-106	378.00
IUUC-Afl-008522	Aspergillus flavus	44.66	5.00e-117	412.00
IUUC-Afu-008904	Aspergillus fumigatus	44.42	3.00e-111	393.00
IUUC-Ani-009198	Aspergillus nidulans	46.24	9.00e-119	418.00
IUUC-Ang-009662	Aspergillus niger	42.56	5.00e-110	389.00
IUUC-Aor-009881	Aspergillus oryzae	45.35	1.00e-115	408.00
IUUC-Ate-010333	Aspergillus terreus	43.79	3.00e-107	380.00
IUUC-Ame-011697	Astyanax mexicanus	39.80	2.00e-109	387.00
IUUC-Bgr-012254	Blumeria graminis	43.38	4.00e-113	399.00
IUUC-Bta-012615	Bos taurus	40.82	8.00e-109	385.00
IUUC-Bci-013720	Botrytis cinerea	42.99	3.00e-112	396.00
IUUC-Bdi-014302	Brachypodium distachyon	38.40	1.00e-88	318.00
IUUC-Bol-015594	Brassica oleracea	36.85	1.00e-76	278.00
IUUC-Bra-017465	Brassica rapa	36.65	2.00e-76	277.00
IUUC-Cel-018632	Caenorhabditis elegans	34.35	4.00e-75	273.00
IUUC-Cja-019747	Callithrix jacchus	40.82	7.00e-109	385.00
IUUC-Cfa-020288	Canis familiaris	40.82	1.00e-108	385.00
IUUC-Cpo-021440	Cavia porcellus	40.61	2.00e-106	377.00
IUUC-Cre-022716	Chlamydomonas reinhardtii	37.66	5.00e-65	239.00
IUUC-Csa-023139	Chlorocebus sabaeus	41.48	2.00e-88	317.00
IUUC-Cho-024481	Choloepus hoffmanni	39.80	2.00e-102	364.00
IUUC-Cin-025106	Ciona intestinalis	37.85	3.00e-100	357.00
IUUC-Csv-026087	Ciona savignyi	36.45	9.00e-98	348.00
IUUC-Cgl-026538	Colletotrichum gloeosporioides	41.42	2.00e-107	381.00
IUUC-Dre-028723	Danio rerio	40.58	2.00e-108	384.00
IUUC-Dno-029299	Dasypus novemcinctus	40.82	1.00e-108	384.00
IUUC-Dse-031562	Dothistroma septosporum	42.22	5.00e-106	375.00
IUUC-Dme-031783	Drosophila melanogaster	38.34	6.00e-85	306.00
IUUC-Ete-032669	Echinops telfairi	40.61	7.00e-109	385.00
IUUC-Eca-033566	Equus caballus	40.82	2.00e-108	384.00
IUUC-Eeu-034524	Erinaceus europaeus	50.84	5.00e-76	276.00
IUUC-Fca-036215	Felis catus	40.82	8.00e-109	385.00
IUUC-Fal-037018	Ficedula albicollis	46.03	5.00e-100	356.00
IUUC-Fox-037936	Fusarium oxysporum	41.86	9.00e-102	362.00
IUUC-Fso-038366	Fusarium solani	42.14	6.00e-107	379.00
IUUC-Gmo-038966	Gadus morhua	36.25	3.00e-70	256.00
IUUC-Ggr-039942	Gaeumannomyces graminis	43.24	2.00e-102	363.00
IUUC-Gga-040797	Gallus gallus	41.53	9.00e-110	388.00
IUUC-Gac-042598	Gasterosteus aculeatus	36.65	3.00e-87	313.00
IUUC-Gma-044220	Glycine max	38.80	1.00e-84	305.00
IUUC-Ggo-044682	Gorilla gorilla	40.82	3.00e-108	383.00
IUUC-Hsa-045804	Homo sapiens	40.82	2.00e-108	384.00
IUUC-Hvu-047567	Hordeum vulgare	37.53	4.00e-80	290.00
IUUC-Itr-047882	Ictidomys tridecemlineatus	40.61	1.00e-108	384.00
IUUC-Kpa-049369	Komagataella pastoris	29.64	4.00e-55	206.00
IUUC-Lch-050074	Latimeria chalumnae	38.48	4.00e-92	330.00
IUUC-Lpe-051333	Leersia perrieri	39.36	2.00e-84	303.00
IUUC-Loc-052164	Lepisosteus oculatus	39.68	1.00e-109	388.00
IUUC-Lma-053088	Leptosphaeria maculans	42.47	2.00e-100	357.00
IUUC-Laf-053460	Loxodonta africana	40.82	8.00e-109	385.00
IUUC-Mcc-055859	Macaca mulatta	40.82	8.00e-109	385.00
IUUC-Meu-056134	Macropus eugenii	40.41	1.00e-108	384.00
IUUC-Mor-057251	Magnaporthe oryzae	42.77	6.00e-102	362.00
IUUC-Mpo-057375	Magnaporthe poae	46.69	6.00e-65	238.00
IUUC-Mtr-057656	Medicago truncatula	39.74	2.00e-77	281.00
IUUC-Mla-059145	Melampsora laricipopulina	51.43	2.00e-132	464.00
IUUC-Mga-059855	Meleagris gallopavo	41.53	1.00e-109	388.00
IUUC-Mvi-060372	Microbotryum violaceum	53.03	4.00e-122	429.00
IUUC-Mmr-060826	Microcebus murinus	40.61	4.00e-108	383.00
IUUC-Mdo-062748	Monodelphis domestica	40.20	2.00e-108	384.00
IUUC-Mmu-063351	Mus musculus	40.61	7.00e-108	382.00
IUUC-Mac-064846	Musa acuminata	35.52	2.00e-75	274.00
IUUC-Mpu-066006	Mustela putorius furo	40.82	8.00e-109	385.00
IUUC-Mlu-067398	Myotis lucifugus	40.82	3.00e-108	383.00
IUUC-Nfi-068399	Neosartorya fischeri	44.72	2.00e-119	420.00
IUUC-Ncr-068711	Neurospora crassa	43.95	2.00e-113	400.00
IUUC-Nle-069982	Nomascus leucogenys	40.82	7.00e-109	385.00
IUUC-Opr-070596	Ochotona princeps	40.82	5.00e-109	386.00
IUUC-Ont-072374	Oreochromis niloticus	39.67	2.00e-97	347.00
IUUC-Oan-073166	Ornithorhynchus anatinus	41.00	3.00e-92	330.00
IUUC-Ocu-074371	Oryctolagus cuniculus	40.82	7.00e-109	385.00
IUUC-Oba-075083	Oryza barthii	37.91	2.00e-86	310.00
IUUC-Obr-076405	Oryza brachyantha	38.11	4.00e-82	296.00
IUUC-Ogl-077683	Oryza glaberrima	38.43	4.00e-86	310.00
IUUC-Ogu-078486	Oryza glumaepatula	38.73	3.00e-87	313.00
IUUC-Oin-079679	Oryza indica	38.52	9.00e-87	312.00
IUUC-Olo-080243	Oryza longistaminata	38.65	1.00e-73	268.00
IUUC-Ome-081230	Oryza meridionalis	38.52	6.00e-87	312.00
IUUC-Oni-082961	Oryza nivara	38.52	7.00e-87	312.00
IUUC-Opu-083189	Oryza punctata	38.43	1.00e-87	315.00
IUUC-Oru-084353	Oryza rufipogon	38.87	7.00e-85	305.00
IUUC-Osa-085458	Oryza sativa	38.52	6.00e-87	312.00
IUUC-Ola-086940	Oryzias latipes	38.45	1.00e-102	364.00
IUUC-Olu-087580	Ostreococcus lucimarinus	36.19	5.00e-60	223.00
IUUC-Oga-088703	Otolemur garnettii	38.98	1.00e-99	355.00
IUUC-Oar-089829	Ovis aries	40.82	8.00e-109	385.00
IUUC-Ptr-090838	Pan troglodytes	40.82	2.00e-108	384.00
IUUC-Pan-092261	Papio anubis	40.73	2.00e-107	380.00
IUUC-Psi-093020	Pelodiscus sinensis	40.70	3.00e-109	387.00
IUUC-Pno-094858	Phaeosphaeria nodorum	42.02	2.00e-96	344.00
IUUC-Ppa-095531	Physcomitrella patens	39.85	1.00e-98	351.00
IUUC-Pfo-096812	Poecilia formosa	35.54	2.00e-79	288.00
IUUC-Pab-097805	Pongo abelii	41.00	2.00e-86	310.00
IUUC-Pop-100051	Populus trichocarpa	38.00	2.00e-84	304.00
IUUC-Pca-100152	Procavia capensis	40.61	8.00e-109	385.00
IUUC-Ppe-101244	Prunus persica	38.33	2.00e-83	300.00
IUUC-Pva-102529	Pteropus vampyrus	39.18	1.00e-100	358.00
IUUC-Pgr-103550	Puccinia graminis	49.63	3.00e-142	496.00
IUUC-Ptt-103951	Puccinia triticina	42.70	5.00e-118	416.00
IUUC-Pte-104151	Pyrenophora teres	42.51	9.00e-96	342.00
IUUC-Pyt-104571	Pyrenophora triticirepentis	43.33	1.00e-98	351.00
IUUC-Rno-105747	Rattus norvegicus	40.61	1.00e-107	381.00
IUUC-Sce-106418	Saccharomyces cerevisiae	29.76	5.00e-58	216.00
IUUC-Sha-107334	Sarcophilus harrisii	40.41	1.00e-108	385.00
IUUC-Sja-107794	Schizosaccharomyces japonicus	38.95	7.00e-87	312.00
IUUC-Spo-108189	Schizosaccharomyces pombe	40.04	1.00e-96	344.00
IUUC-Ssl-108550	Sclerotinia sclerotiorum	42.10	6.00e-111	392.00
IUUC-Smo-109578	Selaginella moellendorffii	37.18	2.00e-85	307.00
IUUC-Sit-110102	Setaria italica	37.20	1.00e-85	308.00
IUUC-Sly-111668	Solanum lycopersicum	38.73	2.00e-85	308.00
IUUC-Stu-111928	Solanum tuberosum	38.93	4.00e-86	310.00
IUUC-Sar-113266	Sorex araneus	35.51	1.00e-88	318.00
IUUC-Sbi-114134	Sorghum bicolor	37.88	5.00e-86	309.00
IUUC-Sre-115114	Sporisorium reilianum	52.14	3.00e-143	499.00
IUUC-Ssc-115443	Sus scrofa	40.82	1.00e-108	385.00
IUUC-Tgu-117157	Taeniopygia guttata	41.12	1.00e-108	384.00
IUUC-Tru-118587	Takifugu rubripes	39.36	5.00e-98	349.00
IUUC-Tsy-119157	Tarsius syrichta	41.25	3.00e-92	330.00
IUUC-Tni-120427	Tetraodon nigroviridis	39.61	4.00e-99	353.00
IUUC-Tca-121368	Theobroma cacao	37.95	1.00e-84	305.00
IUUC-Tre-122074	Trichoderma reesei	41.52	1.00e-105	374.00
IUUC-Tvi-122349	Trichoderma virens	41.05	1.00e-104	371.00
IUUC-Tae-123589	Triticum aestivum	36.80	2.00e-80	291.00
IUUC-Tur-126532	Triticum urartu	42.23	2.00e-76	277.00
IUUC-Tme-126951	Tuber melanosporum	46.07	6.00e-118	415.00
IUUC-Tbe-128136	Tupaia belangeri	36.33	2.00e-88	318.00
IUUC-Ttr-129169	Tursiops truncatus	42.86	1.00e-64	238.00
IUUC-Uma-129399	Ustilago maydis	53.40	6.00e-137	478.00
IUUC-Vda-129842	Verticillium dahliae	40.98	4.00e-108	383.00
IUUC-Vpa-130440	Vicugna pacos	40.82	9.00e-109	385.00
IUUC-Vvi-131075	Vitis vinifera	39.63	3.00e-85	307.00
IUUC-Xma-133002	Xiphophorus maculatus	39.75	7.00e-84	301.00
IUUC-Yli-134569	Yarrowia lipolytica	35.40	4.00e-78	283.00
IUUC-Zma-135799	Zea mays	36.24	3.00e-82	297.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence