iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-130994

UUCD1 version

UUC-ViV-00001

Ensembl Protein ID

VIT_18s0001g14860.t01

UniProt Accession

F6GZT1; F6GZT1_VITVI

Genbank Protein ID

CCB46068.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595227

Gene Name

VIT_18s0001g14860

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_18s0001g14860	VIT_18s0001g14860.t01	VIT_18s0001g14860.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/SKP1	1.60e-32	112.0	148	195

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/SKP1

   S: 1    ksLLdltcktVadmikgktpeeiRktFnienDftpeEeakvReEnqWA 48
           ksLLdltc+tVadmikgktpeeiRktFni+nDftpeEe++vR+EnqWA
   Q: 148  KSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWA 195
           89*********************************************9 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MQPTVLGVIR RLRGDNHTFL FFPYLTSLRN LGLGFRLQER IMSSSRKITL KSSDGEAFDV 60
DEAVALESQT IKHMIEDDCA DNGIPLPNVT SKILSKVIEY CKKHVEAPKP EERSGVDEEL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCAGCCAA CTGTTCTGGG AGTCATTCGG AGGCTTAGAG GGTAAGTAAA TTTATTTTCC 60
CTTTTTCATA TAAAAATATA TATATATATT TTTTTATTGC ATTTTAATTT TGTTTTCTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001232--SKP1-like
IPR011333--SKP1/BTB/POZ
IPR016072--Skp1_comp_dimer
IPR016073--Skp1_comp_POZ

Pfam

PF01466--Skp1
PF03931--Skp1_POZ

SMART

SM00512--Skp1

Gene Ontology

GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002858	Amborella trichopoda	83.55	7.00e-61	224.00
IUUC-Aly-006066	Arabidopsis lyrata	80.47	2.00e-66	243.00
IUUC-Ath-006881	Arabidopsis thaliana	78.36	3.00e-66	243.00
IUUC-Bgr-012280	Blumeria graminis	52.78	3.00e-34	136.00
IUUC-Bdi-014448	Brachypodium distachyon	74.27	5.00e-56	209.00
IUUC-Bol-015842	Brassica oleracea	80.50	3.00e-66	243.00
IUUC-Bra-016913	Brassica rapa	80.50	3.00e-66	243.00
IUUC-Cre-022751	Chlamydomonas reinhardtii	68.59	4.00e-53	199.00
IUUC-Ggr-039831	Gaeumannomyces graminis	51.37	5.00e-37	145.00
IUUC-Gma-043086	Glycine max	91.03	3.00e-74	269.00
IUUC-Lpe-050890	Leersia perrieri	77.78	1.00e-56	211.00
IUUC-Mor-057176	Magnaporthe oryzae	49.32	5.00e-36	142.00
IUUC-Mpo-057471	Magnaporthe poae	51.37	5.00e-37	145.00
IUUC-Mtr-058258	Medicago truncatula	88.46	3.00e-69	252.00
IUUC-Oba-075368	Oryza barthii	72.73	2.00e-58	217.00
IUUC-Obr-076218	Oryza brachyantha	76.14	2.00e-61	227.00
IUUC-Ogl-077679	Oryza glaberrima	72.73	2.00e-58	217.00
IUUC-Ogu-078125	Oryza glumaepatula	73.33	2.00e-59	220.00
IUUC-Oin-079779	Oryza indica	73.33	8.00e-59	218.00
IUUC-Olo-080526	Oryza longistaminata	69.19	1.00e-51	194.00
IUUC-Ome-081330	Oryza meridionalis	73.78	1.00e-59	220.00
IUUC-Oni-082143	Oryza nivara	73.33	8.00e-59	218.00
IUUC-Opu-083354	Oryza punctata	77.19	4.00e-57	213.00
IUUC-Oru-084246	Oryza rufipogon	74.85	1.00e-54	204.00
IUUC-Osa-085416	Oryza sativa	73.33	8.00e-59	218.00
IUUC-Ppa-095274	Physcomitrella patens	78.21	2.00e-61	227.00
IUUC-Pop-098957	Populus trichocarpa	89.81	5.00e-74	268.00
IUUC-Ppe-101503	Prunus persica	90.38	2.00e-75	273.00
IUUC-Ssl-108591	Sclerotinia sclerotiorum	48.98	9.00e-35	138.00
IUUC-Smo-109307	Selaginella moellendorffii	79.49	3.00e-61	226.00
IUUC-Sit-110769	Setaria italica	72.78	9.00e-57	211.00
IUUC-Sly-111529	Solanum lycopersicum	85.26	8.00e-69	251.00
IUUC-Stu-112023	Solanum tuberosum	85.33	7.00e-67	244.00
IUUC-Sbi-114358	Sorghum bicolor	75.74	5.00e-54	202.00
IUUC-Tca-121022	Theobroma cacao	92.26	2.00e-74	270.00
IUUC-Tre-122004	Trichoderma reesei	47.65	1.00e-27	115.00
IUUC-Tvi-122449	Trichoderma virens	48.65	4.00e-28	116.00
IUUC-Vda-129691	Verticillium dahliae	48.00	5.00e-33	132.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence