iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mac-064820

Ensembl Protein ID

GSMUA_Achr4P21030_001

UniProt Accession

M0SQR6; M0SQR6_MUSAM

Protein Name

Auxin-responsive protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GSMUA_Achr4G21030_001	GSMUA_Achr4T21030_001	GSMUA_Achr4P21030_001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	2.70e-18	66.8	102	187

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrt.lt...........elknsevalkYeDedGDlvtlksDedldkavsllaskksllr 78
            vkvs++g+++++++dl+++ ++++L++a+ + ++           + ++se+a++YeD+dGDl+ l++D+++++++s      s+ r
   Q: 102  YVKVSMDGAPYLRKIDLKVYKGYKELREALDDmFKcfslgefprkeGCSGSEYAITYEDKDGDLM-LVGDVPWEMFIS------SCRR 182
           69******************************744788999999999******************.************......**** PP
   S: 79   lliqk 83
           l+i+k
   Q: 183  LRIMK 187
           ***98 PP

Organism

Musa acuminata

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MEAAGESLRD TELRLGLPGT DAPEKPASTV TRGGKRALPE DDEEGYAKSN KSSSEEEQGE 60
GDLCCQEPPA AKAQVVGWPP IRSYRKNSLH ARKVEGEAAG LYVKVSMDGA PYLRKIDLKV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAGCTG CGGGAGAGAG CCTGAGAGAC ACCGAGCTGA GGCTCGGATT GCCAGGCACC 60
GACGCGCCTG AGAAGCCGGC GTCGACTGTG ACAAGGGGCG GCAAGCGAGC CCTCCCGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

mus:103983123

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000969	Aegilops tauschii	48.66	6.00e-46	176.00
IUUC-Atr-002618	Amborella trichopoda	57.65	1.00e-58	218.00
IUUC-Aly-005805	Arabidopsis lyrata	54.64	2.00e-50	191.00
IUUC-Ath-007370	Arabidopsis thaliana	55.38	2.00e-54	205.00
IUUC-Bol-015312	Brassica oleracea	56.70	1.00e-54	204.00
IUUC-Bra-018063	Brassica rapa	57.22	4.00e-55	206.00
IUUC-Cel-018114	Caenorhabditis elegans	40.54	1.60e+00	26.20
IUUC-Gma-042959	Glycine max	63.35	1.00e-61	228.00
IUUC-Mtr-058771	Medicago truncatula	60.31	1.00e-56	211.00
IUUC-Oba-075141	Oryza barthii	54.67	5.00e-51	192.00
IUUC-Obr-076144	Oryza brachyantha	49.33	5.00e-46	176.00
IUUC-Ogl-077720	Oryza glaberrima	46.93	3.00e-44	171.00
IUUC-Ogu-078093	Oryza glumaepatula	52.58	7.00e-49	186.00
IUUC-Oin-079780	Oryza indica	52.11	4.00e-48	183.00
IUUC-Oni-083078	Oryza nivara	52.11	4.00e-48	183.00
IUUC-Oru-084991	Oryza rufipogon	52.11	4.00e-48	183.00
IUUC-Osa-085321	Oryza sativa	52.11	4.00e-48	183.00
IUUC-Pop-100057	Populus trichocarpa	61.19	1.00e-62	231.00
IUUC-Ppe-101322	Prunus persica	61.34	2.00e-60	224.00
IUUC-Sit-109772	Setaria italica	53.23	2.00e-50	191.00
IUUC-Sly-110939	Solanum lycopersicum	59.69	2.00e-56	210.00
IUUC-Stu-112670	Solanum tuberosum	58.12	1.00e-56	211.00
IUUC-Tca-121147	Theobroma cacao	63.68	4.00e-62	229.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence