iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131617

Ensembl Protein ID

VIT_02s0012g02270.t01

UniProt Accession

F6HT40; F6HT40_VITVI

Genbank Protein ID

CCB57850.1

Protein Name

Autophagy protein 5

Genbank Nucleotide ID

FN596247

Gene Name

ATG5; VIT_02s0012g02270

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_02s0012g02270	VIT_02s0012g02270.t01	VIT_02s0012g02270.t01

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/Other	24.19	9.00e-07	49.30	IUUC-Sce-106216

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Vitis vinifera

Functional Description
(View)

Required for autophagy.

Protein Sequence
(Fasta)

MDVEAMGREA QKYVWEGAIP LQIHLHESEV TTLPHPSPAL VLAPRMGYLP LLLPLLKPHF 60
SSTLPPGVDT IWFEYKGLAL KWHIPTGVLF DLLCAEQERP WNLTVHFRGY PGNILTPCEG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCATAAT TAACTGAAAA CCTCAAAACC TTGTATCAGG AGTGAAGGAC CGTGCAAGAG 60
GAAGGGCGTA GGTGCGTTCC GGGGAAGAAG AGGTGAAGAG ATGGATGTAG AAGCTATGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0072--Autophagy
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-1017--Isopeptide bond
KW-1185--Reference proteome
KW-0813--Transport
KW-0832--Ubl conjugation

Interpro

IPR007239--Atg5

Pfam

PF04106--APG5

Gene Ontology

GO:0034274--C:Atg12-Atg5-Atg16 complex
GO:0034045--C:pre-autophagosomal structure membrane
GO:0000045--P:autophagosome assembly
GO:0006501--P:C-terminal protein lipidation
GO:0006995--P:cellular response to nitrogen starvation
GO:0050832--P:defense response to fungus
GO:0010150--P:leaf senescence
GO:0000422--P:mitophagy
GO:0044804--P:nucleophagy
GO:0006810--P:transport

KEGG

vvi:100249011

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000583	Aegilops tauschii	50.55	2.00e-94	339.00
IUUC-Aml-002403	Ailuropoda melanoleuca	34.76	7.00e-24	103.00
IUUC-Atr-002645	Amborella trichopoda	57.22	2.00e-103	367.00
IUUC-Apl-003611	Anas platyrhynchos	34.76	9.00e-25	106.00
IUUC-Aca-004411	Anolis carolinensis	31.76	2.00e-22	98.60
IUUC-Aly-005636	Arabidopsis lyrata	61.26	2.00e-119	421.00
IUUC-Ath-006959	Arabidopsis thaliana	61.54	2.00e-118	417.00
IUUC-Ago-007978	Ashbya gossypii	25.81	2.00e-07	48.50
IUUC-Acl-008328	Aspergillus clavatus	34.13	6.00e-18	84.00
IUUC-Afl-008638	Aspergillus flavus	37.31	3.00e-27	114.00
IUUC-Afu-009042	Aspergillus fumigatus	36.32	2.00e-25	108.00
IUUC-Ani-009364	Aspergillus nidulans	37.77	9.00e-27	113.00
IUUC-Aor-009889	Aspergillus oryzae	37.31	3.00e-27	114.00
IUUC-Ate-010511	Aspergillus terreus	37.50	3.00e-06	42.70
IUUC-Ame-011644	Astyanax mexicanus	36.71	2.00e-06	42.70
IUUC-Bgr-012153	Blumeria graminis	30.51	7.00e-13	66.60
IUUC-Bta-012360	Bos taurus	37.50	1.00e-22	98.20
IUUC-Bci-013723	Botrytis cinerea	34.71	7.00e-14	70.10
IUUC-Bdi-014520	Brachypodium distachyon	52.54	6.00e-96	343.00
IUUC-Bol-016053	Brassica oleracea	61.37	7.00e-121	425.00
IUUC-Bra-017072	Brassica rapa	60.94	4.00e-120	423.00
IUUC-Cel-018529	Caenorhabditis elegans	26.60	9.00e-11	59.70
IUUC-Cja-019569	Callithrix jacchus	26.61	5.00e-27	113.00
IUUC-Cfa-020473	Canis familiaris	26.61	9.00e-27	112.00
IUUC-Cpo-021421	Cavia porcellus	26.05	5.00e-26	110.00
IUUC-Cre-022862	Chlamydomonas reinhardtii	35.76	1.00e-19	89.00
IUUC-Csa-024197	Chlorocebus sabaeus	26.89	5.00e-27	113.00
IUUC-Cho-024521	Choloepus hoffmanni	25.00	1.00e-20	92.40
IUUC-Cin-025119	Ciona intestinalis	33.33	6.00e-23	100.00
IUUC-Csv-026192	Ciona savignyi	33.73	9.00e-24	102.00
IUUC-Cgl-026686	Colletotrichum gloeosporioides	28.40	2.00e-06	45.40
IUUC-Dre-028466	Danio rerio	27.27	2.00e-25	108.00
IUUC-Dno-029141	Dasypus novemcinctus	50.00	4.30e-01	26.90
IUUC-Dse-031228	Dothistroma septosporum	31.08	1.00e-21	96.30
IUUC-Dme-031703	Drosophila melanogaster	28.57	4.00e-18	84.30
IUUC-Ete-032482	Echinops telfairi	35.51	4.00e-20	90.50
IUUC-Eca-034036	Equus caballus	35.37	4.00e-24	103.00
IUUC-Eeu-035235	Erinaceus europaeus	35.03	4.00e-22	97.40
IUUC-Fca-036263	Felis catus	26.61	9.00e-27	112.00
IUUC-Fal-037064	Ficedula albicollis	34.76	4.00e-24	103.00
IUUC-Fox-037813	Fusarium oxysporum	29.71	4.00e-12	63.90
IUUC-Fso-038139	Fusarium solani	30.54	2.00e-11	62.00
IUUC-Gmo-039509	Gadus morhua	34.76	1.00e-23	102.00
IUUC-Ggr-040111	Gaeumannomyces graminis	27.59	8.00e-12	63.50
IUUC-Gga-040517	Gallus gallus	34.76	3.00e-24	104.00
IUUC-Gac-042270	Gasterosteus aculeatus	34.76	1.00e-22	99.40
IUUC-Gma-044400	Glycine max	75.24	5.00e-80	289.00
IUUC-Ggo-045048	Gorilla gorilla	33.53	1.00e-23	102.00
IUUC-Hsa-046744	Homo sapiens	34.76	4.00e-24	103.00
IUUC-Kpa-049174	Komagataella pastoris	25.20	2.00e-12	65.50
IUUC-Lch-049475	Latimeria chalumnae	32.93	2.00e-23	101.00
IUUC-Lpe-051283	Leersia perrieri	52.26	9.00e-93	334.00
IUUC-Loc-052446	Lepisosteus oculatus	25.83	2.00e-25	108.00
IUUC-Lma-053278	Leptosphaeria maculans	33.83	5.00e-21	94.00
IUUC-Laf-054020	Loxodonta africana	34.76	5.00e-24	103.00
IUUC-Mcc-055176	Macaca mulatta	34.76	4.00e-24	103.00
IUUC-Mor-057164	Magnaporthe oryzae	33.53	3.00e-14	71.60
IUUC-Mpo-057428	Magnaporthe poae	32.38	3.00e-10	58.20
IUUC-Mtr-058424	Medicago truncatula	70.78	2.00e-77	281.00
IUUC-Mla-058872	Melampsora laricipopulina	29.26	2.00e-09	56.20
IUUC-Mga-059859	Meleagris gallopavo	34.76	3.00e-24	104.00
IUUC-Mmr-061482	Microcebus murinus	26.61	1.00e-26	112.00
IUUC-Mdo-062371	Monodelphis domestica	33.53	1.00e-25	108.00
IUUC-Mmu-063139	Mus musculus	35.98	3.00e-24	104.00
IUUC-Mac-065332	Musa acuminata	56.60	9.00e-113	399.00
IUUC-Mpu-066783	Mustela putorius furo	26.33	3.00e-26	110.00
IUUC-Mlu-068165	Myotis lucifugus	25.96	1.00e-25	108.00
IUUC-Nfi-068578	Neosartorya fischeri	36.00	2.00e-26	112.00
IUUC-Ncr-068636	Neurospora crassa	30.95	7.00e-10	57.40
IUUC-Nle-069740	Nomascus leucogenys	34.76	4.00e-24	103.00
IUUC-Opr-070802	Ochotona princeps	35.03	7.00e-22	96.70
IUUC-Ont-072222	Oreochromis niloticus	27.78	4.00e-27	114.00
IUUC-Oan-072760	Ornithorhynchus anatinus	35.76	6.00e-26	109.00
IUUC-Ocu-074844	Oryctolagus cuniculus	43.40	7.00e-05	39.70
IUUC-Oba-075834	Oryza barthii	53.49	1.00e-99	355.00
IUUC-Obr-076230	Oryza brachyantha	48.61	2.00e-71	261.00
IUUC-Ogl-077554	Oryza glaberrima	53.49	1.00e-99	355.00
IUUC-Ogu-078687	Oryza glumaepatula	52.79	7.00e-99	353.00
IUUC-Oin-079677	Oryza indica	52.96	2.00e-97	348.00
IUUC-Olo-081078	Oryza longistaminata	48.84	5.00e-93	333.00
IUUC-Ome-081548	Oryza meridionalis	53.23	2.00e-103	369.00
IUUC-Oni-082050	Oryza nivara	53.49	8.00e-100	355.00
IUUC-Opu-083609	Oryza punctata	52.51	1.00e-100	358.00
IUUC-Oru-085057	Oryza rufipogon	53.49	5.00e-100	356.00
IUUC-Osa-085917	Oryza sativa	53.23	6.00e-99	353.00
IUUC-Ola-087032	Oryzias latipes	27.50	1.00e-25	108.00
IUUC-Oga-088468	Otolemur garnettii	35.37	3.00e-25	107.00
IUUC-Oar-089751	Ovis aries	26.61	2.00e-26	112.00
IUUC-Ptr-091064	Pan troglodytes	34.76	4.00e-24	103.00
IUUC-Pan-092505	Papio anubis	34.76	4.00e-24	103.00
IUUC-Psi-093086	Pelodiscus sinensis	33.53	2.00e-24	104.00
IUUC-Pno-094825	Phaeosphaeria nodorum	32.70	2.00e-17	81.60
IUUC-Ppa-095419	Physcomitrella patens	41.65	1.00e-81	296.00
IUUC-Pfo-096224	Poecilia formosa	35.26	5.00e-23	100.00
IUUC-Pab-098501	Pongo abelii	34.76	2.00e-23	102.00
IUUC-Pop-099243	Populus trichocarpa	67.96	1.00e-128	451.00
IUUC-Pca-101039	Procavia capensis	28.77	4.30e+00	25.40
IUUC-Ppe-101255	Prunus persica	70.46	8.00e-143	498.00
IUUC-Pva-102828	Pteropus vampyrus	26.89	2.00e-27	115.00
IUUC-Pgr-103672	Puccinia graminis	28.09	2.00e-08	53.10
IUUC-Ptt-104013	Puccinia triticina	29.12	3.00e-09	55.50
IUUC-Pyt-104615	Pyrenophora triticirepentis	28.52	1.00e-19	89.40
IUUC-Rno-106089	Rattus norvegicus	34.29	1.00e-18	85.90
IUUC-Sce-106216	Saccharomyces cerevisiae	24.19	1.00e-07	49.30
IUUC-Sha-106484	Sarcophilus harrisii	34.71	2.00e-25	108.00
IUUC-Sja-107699	Schizosaccharomyces japonicus	30.86	2.00e-18	85.10
IUUC-Spo-108177	Schizosaccharomyces pombe	24.73	5.00e-15	73.90
IUUC-Ssl-108475	Sclerotinia sclerotiorum	32.53	5.00e-14	70.50
IUUC-Smo-109473	Selaginella moellendorffii	38.80	2.00e-63	235.00
IUUC-Sit-110736	Setaria italica	50.14	1.00e-93	335.00
IUUC-Sly-111657	Solanum lycopersicum	57.83	9.00e-134	469.00
IUUC-Sar-113050	Sorex araneus	35.04	2.00e-20	91.70
IUUC-Sbi-114258	Sorghum bicolor	49.58	2.00e-95	341.00
IUUC-Sre-114902	Sporisorium reilianum	24.31	7.00e-12	64.70
IUUC-Ssc-116166	Sus scrofa	35.37	1.00e-23	102.00
IUUC-Tgu-116814	Taeniopygia guttata	34.76	4.00e-24	103.00
IUUC-Tru-118172	Takifugu rubripes	26.39	3.00e-26	111.00
IUUC-Tsy-119010	Tarsius syrichta	34.15	5.00e-25	107.00
IUUC-Tni-120397	Tetraodon nigroviridis	33.33	6.00e-24	102.00
IUUC-Tca-121283	Theobroma cacao	71.47	4.00e-146	509.00
IUUC-Tvi-122545	Trichoderma virens	29.34	6.00e-10	57.00
IUUC-Tae-122685	Triticum aestivum	54.74	1.00e-81	295.00
IUUC-Tur-126407	Triticum urartu	50.91	2.00e-92	331.00
IUUC-Tme-126913	Tuber melanosporum	27.30	5.00e-23	100.00
IUUC-Tbe-127738	Tupaia belangeri	23.53	6.00e-15	72.80
IUUC-Ttr-128528	Tursiops truncatus	34.76	2.00e-23	102.00
IUUC-Uma-129625	Ustilago maydis	24.89	1.00e-11	63.90
IUUC-Vda-129906	Verticillium dahliae	26.40	2.00e-08	51.60
IUUC-Vpa-130223	Vicugna pacos	32.45	9.00e-24	102.00
IUUC-Xtr-132288	Xenopus tropicalis	34.15	3.00e-25	107.00
IUUC-Xma-134214	Xiphophorus maculatus	35.26	4.00e-23	100.00
IUUC-Yli-134377	Yarrowia lipolytica	24.00	6.00e-05	40.40
IUUC-Zma-135108	Zea mays	44.57	2.00e-81	295.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence