iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002723

Ensembl Protein ID

ERN08981

UniProt Accession

W1PMP7; W1PMP7_AMBTC

Genbank Protein ID

ERN08981.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

KI393119

Gene Name

AMTR_s00153p00035720

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00153p00035720	ERN08981	ERN08981

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.80e-31	106.8	272	343

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +p+ef+CpIsl+lMrdPv+++sG+tydr +I++w++ g+ tcP+ +q+l +  l+Pn +lr+li++wc++n+
   Q: 272  IPDEFKCPISLDLMRDPVIVASGHTYDRPAIAEWINFGHPTCPKSGQKLLHMALIPNFALRSLIHQWCSDNN 343
           8********************************************************************986 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MAKATSNFTT FFPLISSPLT LVQGLLESTK ELASMDKLHH LQVRNSSAMI RKAKLLQPLF 60
EDLKETPAPL PPSSFLCFRE LIDAIRKAKK LINECKSGSR VWNLIQIEPI SSRFHGLTRD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCAAGG CCACCTCTAA TTTCACAACC TTCTTCCCCT TGATCTCATC GCCATTAACT 60
CTTGTTCAAG GCCTCCTGGA ATCCACAAAA GAGCTCGCCT CCATGGACAA GCTCCATCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-042912	Glycine max	51.44	2.00e-134	471.00
IUUC-Mtr-058278	Medicago truncatula	48.22	1.00e-157	548.00
IUUC-Pop-099478	Populus trichocarpa	50.90	6.00e-147	513.00
IUUC-Ppe-101201	Prunus persica	49.64	8.00e-161	559.00
IUUC-Sly-111580	Solanum lycopersicum	49.56	9.00e-127	446.00
IUUC-Stu-112508	Solanum tuberosum	49.18	3.00e-150	524.00
IUUC-Tca-121845	Theobroma cacao	51.27	5.00e-175	606.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence