iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098818

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000344

Gene Name

POPTRDRAFT_564063; POPTR_0008s07160g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0008s07160	POPTR_0008s07160.1	POPTR_0008s07160.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.90e-32	112.3	268	340

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p+ef+CpIsl+lM+dPv+++sG+tydr+sI++w++sg++tcP+ +++l +++l+Pn++l++l+++wc++n++
   Q: 268  IPDEFRCPISLDLMKDPVIVASGHTYDRNSIAQWINSGHHTCPKSGKRLIHTSLIPNYALKSLVHQWCQDNNV 340
           8********************************************************************9975 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MPTGSLMKSL IHISNEVASV EKLPFSQFRN ISTMIRRIKF LSFLFEDIRE TNSPLPPSSL 60
LCLTELFSVI QRVKLLIQRC KGGSSLWGLI QTEFLSNQFH ALVKEMGGAL DILPLNLLNL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCAACTG GGTCTTTGAT GAAATCGTTG ATTCATATAT CCAATGAAGT TGCATCAGTG 60
GAAAAGCTTC CTTTTTCACA GTTTAGGAAC ATTTCAACCA TGATAAGGAG GATCAAGTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pop:POPTR_0008s07160g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-042912	Glycine max	64.95	0.00e+00	707.00
IUUC-Lch-049908	Latimeria chalumnae	45.00	5.00e-09	56.20
IUUC-Ppa-095610	Physcomitrella patens	46.12	8.00e-156	543.00
IUUC-Smo-109110	Selaginella moellendorffii	45.14	7.00e-151	526.00
IUUC-Sly-111580	Solanum lycopersicum	69.05	0.00e+00	725.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence