iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131309

UUCD1 version

UUC-ViV-00897

Ensembl Protein ID

VIT_18s0122g00870.t01

UniProt Accession

F6I6U9; F6I6U9_VITVI

Genbank Protein ID

CCB62667.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596759

Gene Name

VIT_18s0122g00870

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_18s0122g00870	VIT_18s0122g00870.t01	VIT_18s0122g00870.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.30e-08	34.1	101	143

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl++f   d+ +vlp CgH fh  C+  w         + +CP Cr
   Q: 101  CAICLTEFvgGDEIRVLPqCGHGFHVGCIDTW------LGSHCSCPSCR 143
           **********666*******************......9*********8 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MTHPSRFLGG VNSSATASQE SAAVDSDFVV ILAALLCALI CVLGLVAVAR CAWLRRISGA 60
ANLPGGSAPQ TPANKGLKKK ILRSLPKVTY AAETAGNLTD CAICLTEFVG GDEIRVLPQC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATCACTTCA ATAATTAAAA CATTAAAAAC TGTAAAATTC TCTAAATCTG AGCTCTCTTT 60
CTCTCTCCTC ACAGGTCACA TGACTCATCC GTCTAGATTC CTCGGCGGCG TGAACTCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002926	Amborella trichopoda	56.74	2.00e-30	124.00
IUUC-Aly-005492	Arabidopsis lyrata	61.54	9.00e-53	198.00
IUUC-Ath-007319	Arabidopsis thaliana	59.16	6.00e-43	166.00
IUUC-Bdi-014058	Brachypodium distachyon	58.14	3.00e-25	107.00
IUUC-Bol-016328	Brassica oleracea	61.97	2.00e-40	157.00
IUUC-Bra-017035	Brassica rapa	66.67	9.00e-37	145.00
IUUC-Gma-042991	Glycine max	64.89	3.00e-45	173.00
IUUC-Lpe-050856	Leersia perrieri	50.71	2.00e-26	110.00
IUUC-Mac-064619	Musa acuminata	57.82	3.00e-33	133.00
IUUC-Oba-075661	Oryza barthii	47.46	6.00e-27	112.00
IUUC-Obr-076446	Oryza brachyantha	47.13	3.00e-30	123.00
IUUC-Ogu-078487	Oryza glumaepatula	42.31	2.00e-24	104.00
IUUC-Oin-079945	Oryza indica	52.14	2.00e-31	127.00
IUUC-Ome-081518	Oryza meridionalis	51.33	1.00e-27	114.00
IUUC-Oni-082929	Oryza nivara	53.10	1.00e-28	118.00
IUUC-Oru-084952	Oryza rufipogon	53.90	5.00e-33	132.00
IUUC-Osa-086101	Oryza sativa	53.10	1.00e-28	118.00
IUUC-Pop-098856	Populus trichocarpa	67.50	1.00e-52	198.00
IUUC-Sly-111851	Solanum lycopersicum	78.20	4.00e-43	166.00
IUUC-Stu-112165	Solanum tuberosum	71.17	3.00e-44	169.00
IUUC-Sbi-114504	Sorghum bicolor	55.84	1.00e-21	94.70
IUUC-Tca-121444	Theobroma cacao	70.47	1.00e-62	231.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence