iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095982

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545069

Gene Name

PHYPADRAFT_141596

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S180_64V6	PP1S180_64V6.1	PP1S180_64V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	2.00e-77	261.4	213	518

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqE 94
           +Gl N gN+C+ N vLQcL+ +++l+ +ll+ +++e+++++     + +++++lq+ ++++  ++++ +sp ++l+ ++++ +++   +q+Da+E
   Q: 213  CGLLNCGNSCFANVVLQCLTYTRPLTAYLLNgSHEEDCRRN-----DWCFMCELQSHVHNV-RQNRNPFSPIRILSRIRNIGNHLGYGRQEDAHE 301
           7******************************8888888877.....56************9.99999**************************** PP
   S: 95   flaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqd 189
           f++f +d++++ +         +e++        e++ ++ +++++li+++F+g+l+sq+kc +c+++s+r+e+++dl ++++g  +    sl+d
   Q: 302  FMRFAIDSMQSIC--------LDEFGG-------EKDVDPATQETTLIHHIFGGHLQSQVKCMQCHHESNRYESMMDLAVEIHGVVD----SLED 377
           *************........334444.......378899********************************************997....8*** PP
   S: 190  cLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavv 284
           ++++ft+ e+l+g+nky+c++c+++++a+k+l++ + P+vL++ LkRf   ++ ++  k+nk+v+fp+ Ld+sp+++  ++    +  Y+L+avv
   Q: 378  AIAQFTTIEMLDGDNKYKCDRCNAYVRARKQLTVYEAPNVLTIALKRF---QS-GKFGKLNKRVTFPEVLDMSPYMSGANDH---PLLYRLYAVV 465
           ************************************************...33.4557********************6644...9********* PP
   S: 285  vHsGslss...GHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           vH   l+    GHY+++vk+++g W+++dD kV+ev+  +vl+   + aY+lfY r
   Q: 466  VHVDMLNAsffGHYICFVKDSNGVWYKIDDRKVKEVDLGKVLT---QRAYMLFYCR 518
           **995554455********************************...9*******76 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MHGWVDLEIS VVLFTLVVTV VVSLAFAHQV TSRTDQRLRR SLRFRAAAVV SAEAEAEFEV 60
DQKSMLDTSI CAVCQKPATR LRCSRCKSTK YCSSKCQLVH WEGGHKKECR TPGASSLSLL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCATGGAT GGGTGGATTT AGAGATATCC GTGGTTTTGT TTACATTGGT TGTTACTGTA 60
GTTGTGTCTT TGGCATTTGC GCATCAAGTG ACCTCGAGAA CTGATCAGAG ATTGAGGAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND
IPR013088--Znf_NHR/GATA

PROSITE

PS00972--USP_1
PS50235--USP_3
PS01360--ZF_MYND_1
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

ppp:PHYPADRAFT_141596

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007277	Arabidopsis thaliana	53.48	4.00e-148	517.00
IUUC-Gma-042958	Glycine max	48.72	2.00e-160	558.00
IUUC-Pop-099232	Populus trichocarpa	56.02	2.00e-150	525.00
IUUC-Sja-107805	Schizosaccharomyces japonicus	40.50	6.00e-64	237.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence