iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lpe-051566

Ensembl Protein ID

LPERR06G18820.1

UniProt Accession

A0A0D9WSK5; A0A0D9WSK5_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
LPERR06G18820	LPERR06G18820.1	LPERR06G18820.1
LPERR06G18820	LPERR06G18820.2	LPERR06G18820.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.40e-07	29.8	2679	2714
ULD/UDP/UBQ/UBQ_Other	1.40e-07	32.1	647	712

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           + v++laf ++ + l+s+++Dg ++ WDlrt ++++
   Q: 2679 GNVRSLAFaDGgNQLLSSGGDGHVYHWDLRTRRCIH 2714
           679*****97779******************99986 PP

ULD/UDP/UBQ/UBQ_Other

   S: 10   gseltlkvnpsdtVaeLKekiekklgip.peqqrLiykGkiLeddktLadyglkdgstihllekks 74
           g+  ++ vn  +t +++K k +kkl +  +e+++L ++Gk+L+dd +La  +++++s++h+++++ 
   Q: 647  GKGVKFLVNAEETPLTVKSKASKKLEFKpSEKIKLFCSGKELQDDISLAMQNVRPNSVLHVVRTEI 712
           554466799*******************899*******************************9875 PP

Organism

Leersia perrieri

Protein Sequence
(Fasta)

MGDGGERRED ENPTTSAADD DDDEDYEEPG GGNHFLGFMF GNVDDSGDLD ADYLDEDAKE 60
HLFALADKLG PSLKDIDLIK SSPAPTDPSE QDYDAKAEDA VDYEDIDEEY DGPEVEAATE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCGACG GCGGGGAGCG CCGCGAGGAC GAGAACCCGA CCACCAGTGC CGCAGGTGAG 60
CTTCGATTCC ACGCCGAGGC GCGGCTCGCT CGGCTTTGGT TTTGGTTTGG TTTCTGCGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0103--Bromodomain
KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR001487--Bromodomain
IPR018359--Bromodomain_CS
IPR009067--TAF_II_230-bd
IPR022591--TFIID_sub1_DUF3591
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS00633--BROMODOMAIN_1
PS50014--BROMODOMAIN_2
PS50053--UBIQUITIN_2
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00439--Bromodomain
PF12157--DUF3591
PF09247--TBP-binding
PF00240--ubiquitin
PF00400--WD40

PRINTS

PR00503--BROMODOMAIN

SMART

SM00297--BROMO
SM00213--UBQ
SM00320--WD40

Gene Ontology

GO:0016021--C:integral component of membrane

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003084	Amborella trichopoda	54.64	0.00e+00	1173.00
IUUC-Aly-005900	Arabidopsis lyrata	43.35	0.00e+00	1232.00
IUUC-Ath-006976	Arabidopsis thaliana	47.37	0.00e+00	1068.00
IUUC-Bol-016211	Brassica oleracea	42.44	0.00e+00	922.00
IUUC-Bra-016868	Brassica rapa	43.03	0.00e+00	1052.00
IUUC-Ete-032702	Echinops telfairi	36.84	3.00e-12	67.80
IUUC-Gmo-039183	Gadus morhua	38.79	4.00e-71	261.00
IUUC-Gma-043047	Glycine max	54.78	0.00e+00	1147.00
IUUC-Hvu-047343	Hordeum vulgare	73.49	0.00e+00	1105.00
IUUC-Mpo-057370	Magnaporthe poae	33.68	3.00e-11	63.90
IUUC-Mac-064798	Musa acuminata	57.07	0.00e+00	1704.00
IUUC-Oba-075663	Oryza barthii	88.68	0.00e+00	2989.00
IUUC-Obr-076214	Oryza brachyantha	89.37	0.00e+00	2945.00
IUUC-Ogl-077575	Oryza glaberrima	89.11	0.00e+00	2969.00
IUUC-Ogu-079017	Oryza glumaepatula	89.28	0.00e+00	2971.00
IUUC-Oin-079864	Oryza indica	88.16	0.00e+00	2941.00
IUUC-Olo-080777	Oryza longistaminata	89.18	0.00e+00	2511.00
IUUC-Ome-081474	Oryza meridionalis	90.27	0.00e+00	3016.00
IUUC-Oni-082068	Oryza nivara	90.57	0.00e+00	2984.00
IUUC-Opu-083274	Oryza punctata	90.41	0.00e+00	2976.00
IUUC-Oru-085067	Oryza rufipogon	90.15	0.00e+00	2974.00
IUUC-Ppa-095489	Physcomitrella patens	52.29	0.00e+00	916.00
IUUC-Pop-099371	Populus trichocarpa	47.70	0.00e+00	1373.00
IUUC-Ppe-101917	Prunus persica	50.04	0.00e+00	1122.00
IUUC-Smo-109033	Selaginella moellendorffii	50.86	0.00e+00	846.00
IUUC-Sit-110106	Setaria italica	68.52	0.00e+00	1692.00
IUUC-Tca-121471	Theobroma cacao	48.39	0.00e+00	1240.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence