iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-006904

UUCD1 version

UUC-ArT-00800

Ensembl Protein ID

AT5G50120.1

UniProt Accession

Q9FG99; Q9FG99_ARATH

Genbank Protein ID

AED95899.1; BAB10298.1

Protein Name

Similarity to GTP-binding regulatory protein and WD-repeat protein; Transducin/WD40 repeat-like superfamily protein

Genbank Nucleotide ID

CP002688; AB026650

Gene Name

MPF21.14; MPF21_14; At5g50120

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT5G50120	AT5G50120.1	AT5G50120.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.00e-37	124.7	164	201
UBD/Beta-Prp	6.20e-40	138.1	163	384

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H d v++la+  d tll s s+D t+k+W+++++++l 
   Q: 164  HVDAVSGLALsRDgTLLYSVSWDRTLKIWRTTDFKCLE 201
           99*********888*********************986 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseDrtikvw..dls........tgkcvhtlkghe 94
           hh + ++ ++ s+d++ll + s+d+t+k+w++t+ k+l+s+   h+++++av +s++g+ + tgs+D+ ikvw  +++        + + v +l++h+
   Q: 163  HHVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFtNAHDDAINAVALSENGD-IYTGSSDQRIKVWrkNINeenvkkkrKHSLVAILSEHN 259
           788899999********************************99***************7.88***********9966677777988999999****** PP
   S: 95   dsvlslsfsp.sgdklvsGshdrtirvwdletgqclee..tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl..ktgkllrtltgghtdsvysls 187
           + + +l++s  +g+ l sG++d  i vw+ + g  +    +l+gh+++v c++v +  ++l sGs+D+tvrlW+   k  ++l  l+g h ++v++l+
   Q: 260  SGINALALSGtNGSLLHSGGSDGSILVWERDDGGDIVVvgMLRGHTESVLCLAVVS--DILCSGSADKTVRLWKCsaKDYSCLAMLEG-HLGPVKCLT 354
           **********77799**************99998887778****************..***************99778889******9.********* PP
   S: 188  ........fdsngkelvsgsldgtvklwdl 209
                    d+ + ++ sg+ld++vk+w++
   Q: 355  gafrdsrkADEASYHIYSGGLDSQVKVWQV 384
           **55555555555***************86 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MIQFQESEEE PDFSQEDHLT SSSQPLHQCI ATLVCHTASY ISSLTLAGKR LYTGSNDGVV 60
RLWNANTLET LAEASSNGDV ITGERGGGGA VKSLVILADK LFTAHQDHKI RVWKINDVVE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTAAATATA TATTGCATCC TACTCATCAT CCCATCACAT TATTCTTTTC GTTTCCGTCA 60
GATTTGCTCA CAACGTAAAG AGTCCAAATT TGATATATAT TAGAATAGTC CAAGTCTAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR002469--Peptidase_S9B_N
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

ath:AT5G50120

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005752	Arabidopsis lyrata	92.54	0.00e+00	723.00
IUUC-Bra-017764	Brassica rapa	80.72	2.00e-170	590.00
IUUC-Gma-043330	Glycine max	56.54	7.00e-119	419.00
IUUC-Mtr-058389	Medicago truncatula	56.46	1.00e-106	379.00
IUUC-Pop-099892	Populus trichocarpa	62.39	4.00e-118	417.00
IUUC-Ppe-101853	Prunus persica	60.05	2.00e-118	418.00
IUUC-Sly-111471	Solanum lycopersicum	55.37	1.00e-110	392.00
IUUC-Stu-112792	Solanum tuberosum	53.97	9.00e-106	375.00
IUUC-Tca-121089	Theobroma cacao	59.95	5.00e-125	440.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence