iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113878

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000766

Gene Name

SORBI_007G224300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb07g028950	Sb07g028950.1	Sb07g028950.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.90e-06	29.1	231	272

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C++     ++ ++ lpC H +h dC+  w       + + +CPlCr
   Q: 231  CAVCKDGVaagQR-VKRLPCSHRYHDDCIVPW------LQVRNSCPLCR 272
           ******9977666.999***************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MASSSIHIHR PRLAGDEIHR TLEASYSPSA SYCSDDAFVP VFRPDPSAPS ASASAAVAAA 60
ADRVRSLFSS VDVALFRDAL FAPVCDGDGD RDGLGFTDAD AEAAEYDGDL TSICWDCLEI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTTCCT CGTCGATCCA CATCCACCGT CCCCGGCTCG CCGGCGACGA GATTCACCGG 60
ACCCTGGAGG CCTCCTACTC CCCCAGCGCG TCTTACTGCT CCGACGACGC CTTCGTCCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_07g028950

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000783	Aegilops tauschii	58.26	2.00e-56	211.00
IUUC-Ame-011175	Astyanax mexicanus	43.82	4.00e-19	86.30
IUUC-Bdi-014039	Brachypodium distachyon	59.52	8.00e-64	235.00
IUUC-Bol-015391	Brassica oleracea	55.56	1.00e-25	108.00
IUUC-Dme-031824	Drosophila melanogaster	45.88	2.00e-20	90.50
IUUC-Gma-043673	Glycine max	36.32	2.00e-26	112.00
IUUC-Hvu-047121	Hordeum vulgare	56.69	6.00e-59	219.00
IUUC-Lpe-051131	Leersia perrieri	61.41	2.00e-54	204.00
IUUC-Oba-075271	Oryza barthii	61.13	7.00e-59	219.00
IUUC-Obr-076279	Oryza brachyantha	61.64	1.00e-58	218.00
IUUC-Ogl-077383	Oryza glaberrima	61.13	7.00e-59	219.00
IUUC-Ogu-078274	Oryza glumaepatula	61.13	3.00e-59	221.00
IUUC-Oin-079119	Oryza indica	61.13	1.00e-58	218.00
IUUC-Ome-081587	Oryza meridionalis	60.62	8.00e-54	202.00
IUUC-Oni-082032	Oryza nivara	60.80	5.00e-59	219.00
IUUC-Opu-083819	Oryza punctata	61.89	2.00e-61	227.00
IUUC-Oru-084467	Oryza rufipogon	61.13	2.00e-59	221.00
IUUC-Osa-085411	Oryza sativa	61.13	1.00e-58	218.00
IUUC-Sit-110546	Setaria italica	74.07	5.00e-73	266.00
IUUC-Stu-112141	Solanum tuberosum	49.17	1.00e-27	116.00
IUUC-Tae-125585	Triticum aestivum	58.10	7.00e-60	223.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence