iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095856

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545187

Gene Name

PHYPADRAFT_171546

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S298_61V6	PP1S298_61V6.1	PP1S298_61V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/F-box	3.30e-06	28.0	11	58

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/F-box

   S: 95   eegpdaglldrlpeeilveilklldkeellraarvcrrwqelasqkal 142
           e  +d+++++rlp +i+v++l +l+ ++l ra+ vc++w+ l+s++++
   Q: 11   EASSDSNSWNRLPGDIVVRVLARLPVPQLFRARTVCKQWNSLTSTPEF 58
           567899**********************************99997776 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MGTIGGLEPD EASSDSNSWN RLPGDIVVRV LARLPVPQLF RARTVCKQWN SLTSTPEFLN 60
LCNGQYEPYF PAIISRKFYR GDSGSCTSGN DEQGGNDLFS VFFGYDHMTE KWQKLPPLDF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTTGTCTCC ACGATAATCT AGTGGGTTTG CATGTATTCC CCTGGTTGTG GAGTCTGGTT 60
CGAGAACAAG CTCCGTCGAT GCGAGGTAGT GCTGTATATA GCGAGCTTGA GCTCTATTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR015915--Kelch-typ_b-propeller

PROSITE

PS50181--FBOX

Pfam

PF00646--F-box

SMART

SM00256--FBOX

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0031146--P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process

KEGG

ppp:PHYPADRAFT_171546

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000136	Aegilops tauschii	22.55	9.00e-08	50.40
IUUC-Atr-002850	Amborella trichopoda	26.65	1.00e-19	90.10
IUUC-Aly-006302	Arabidopsis lyrata	22.06	4.00e-09	55.10
IUUC-Ath-006968	Arabidopsis thaliana	21.46	8.00e-09	54.30
IUUC-Bol-015604	Brassica oleracea	21.32	2.00e-07	50.10
IUUC-Bra-017678	Brassica rapa	21.32	1.00e-07	50.10
IUUC-Gma-043918	Glycine max	46.81	2.00e-07	49.30
IUUC-Lpe-051557	Leersia perrieri	22.68	4.00e-05	44.70
IUUC-Loc-052324	Lepisosteus oculatus	32.00	8.00e-05	41.20
IUUC-Mtr-058083	Medicago truncatula	24.48	7.00e-14	71.20
IUUC-Mac-064570	Musa acuminata	23.49	1.00e-15	76.60
IUUC-Oba-075140	Oryza barthii	24.52	2.00e-08	53.10
IUUC-Ogl-076999	Oryza glaberrima	23.03	2.00e-07	50.80
IUUC-Ogu-078155	Oryza glumaepatula	22.52	7.00e-08	52.80
IUUC-Oin-079846	Oryza indica	48.39	3.00e-03	35.80
IUUC-Olo-080435	Oryza longistaminata	23.03	1.00e-07	50.40
IUUC-Oni-082603	Oryza nivara	23.03	1.00e-07	51.20
IUUC-Opu-083845	Oryza punctata	39.58	2.00e-06	46.60
IUUC-Oru-084992	Oryza rufipogon	24.52	2.00e-08	52.80
IUUC-Osa-086023	Oryza sativa	23.03	8.00e-08	50.80
IUUC-Pop-099723	Populus trichocarpa	25.43	3.00e-15	75.90
IUUC-Ppe-101645	Prunus persica	25.06	3.00e-14	72.40
IUUC-Smo-109217	Selaginella moellendorffii	28.39	1.00e-25	110.00
IUUC-Sit-109947	Setaria italica	25.28	6.00e-07	49.30
IUUC-Sly-111026	Solanum lycopersicum	24.15	2.00e-13	69.30
IUUC-Stu-111937	Solanum tuberosum	23.72	2.00e-13	69.30
IUUC-Sbi-114342	Sorghum bicolor	44.74	6.00e-04	38.10
IUUC-Tca-121846	Theobroma cacao	25.96	4.00e-15	75.10
IUUC-Tae-124828	Triticum aestivum	28.19	2.00e-08	53.10
IUUC-Tur-126662	Triticum urartu	34.62	3.00e-07	49.30
IUUC-Vvi-130852	Vitis vinifera	25.99	2.00e-12	66.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence