iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131676

UUCD1 version

UUC-ViV-00808

Ensembl Protein ID

VIT_07s0191g00230.t01

UniProt Accession

F6HRP9; F6HRP9_VITVI

Genbank Protein ID

CCB57357.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596027

Gene Name

RING1; VIT_07s0191g00230

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_07s0191g00230	VIT_07s0191g00230.t01	VIT_07s0191g00230.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.10e-07	31.0	129	171

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl +f  ++ +++lp C H+fh  C+  w       + + +CPlCr
   Q: 129  CSVCLGEFeeDESLRLLPkCSHAFHVPCIDTW------LRSHKNCPLCR 171
           ********7655599999**************......**********8 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MICFKGCHRC ATFCFRLLPP PSPPPPPPLR PHEISPILIF IVCTLGAVFF VVSCCTVVLK 60
YYSGWNRSRR SDPPVQNHTH EDFIDEEQSP VVYHPIWLIN TVGLQQSVID LITVIKYNKE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATGGAT GGAGTGAATT GACTTGAACC AAGCCCAAAC AAAACGAAAC TACCAAGTAA 60
ATGCTCGAGT CTTCCACTGA GAAGGAAATT TCGCTGTCAT CCCATAAGGA CGTTGTGGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

vvi:100854068

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005829	Arabidopsis lyrata	51.85	4.00e-35	140.00
IUUC-Bdi-014119	Brachypodium distachyon	60.76	4.00e-26	111.00
IUUC-Gma-043544	Glycine max	72.32	2.00e-42	165.00
IUUC-Ogu-078886	Oryza glumaepatula	53.92	4.00e-26	111.00
IUUC-Ome-081516	Oryza meridionalis	53.92	4.00e-26	111.00
IUUC-Pop-098897	Populus trichocarpa	47.26	1.00e-71	262.00
IUUC-Ppe-101478	Prunus persica	53.39	4.00e-68	251.00
IUUC-Sly-111280	Solanum lycopersicum	43.32	2.00e-57	214.00
IUUC-Stu-112147	Solanum tuberosum	42.82	5.00e-61	227.00
IUUC-Tca-120978	Theobroma cacao	50.99	3.00e-65	241.00
IUUC-Tae-123532	Triticum aestivum	51.40	5.00e-30	124.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence