iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111702

Ensembl Protein ID

Solyc04g082570.2.1

UniProt Accession

K4BVY4; K4BVY4_SOLLC

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc04g082570.2	Solyc04g082570.2.1	Solyc04g082570.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.10e-17	64.6	1	64

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 15   MrdPvvlpsGitydrssIekwlasggk.....tcPvtrqplteedlvPnltlrrliqawceens 73
           M+dPv+l++G+t++r++Iekw+++++       cP+t++ l++++l P+++lr++i++w ++n+
   Q: 1    MQDPVTLENGMTFEREAIEKWFKECRDsgrkpVCPLTHRDLKSTELNPSIALRNTIEEWNARNE 64
           9*********************6655555569***************************99987 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MQDPVTLENG MTFEREAIEK WFKECRDSGR KPVCPLTHRD LKSTELNPSI ALRNTIEEWN 60
ARNEAAQIDM ARRSLSMGSA EGDIMQALKF VQHLCQKSRA NKHVIRNADL IPMIVDMLKT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCAGGATC CTGTTACTCT GGAAAATGGC ATGACTTTTG AGAGGGAAGC TATTGAGAAA 60
TGGTTCAAGG AGTGTAGGGA TAGTGGAAGA AAGCCTGTTT GCCCTTTAAC ACATAGAGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR001263--PInositide-3_kin_accessory_dom
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000143	Aegilops tauschii	66.06	0.00e+00	1025.00
IUUC-Atr-002916	Amborella trichopoda	65.85	0.00e+00	992.00
IUUC-Aly-006004	Arabidopsis lyrata	67.32	0.00e+00	970.00
IUUC-Ath-007153	Arabidopsis thaliana	66.67	0.00e+00	960.00
IUUC-Bdi-014487	Brachypodium distachyon	63.99	0.00e+00	997.00
IUUC-Bol-016384	Brassica oleracea	65.07	0.00e+00	905.00
IUUC-Bra-017058	Brassica rapa	65.50	0.00e+00	937.00
IUUC-Gma-044318	Glycine max	79.02	0.00e+00	1229.00
IUUC-Hvu-047783	Hordeum vulgare	65.93	0.00e+00	1029.00
IUUC-Lpe-050971	Leersia perrieri	66.19	0.00e+00	983.00
IUUC-Mtr-058511	Medicago truncatula	79.40	0.00e+00	1216.00
IUUC-Mac-064911	Musa acuminata	65.28	0.00e+00	989.00
IUUC-Oba-075225	Oryza barthii	66.06	0.00e+00	1021.00
IUUC-Obr-076103	Oryza brachyantha	65.41	0.00e+00	976.00
IUUC-Ogl-077529	Oryza glaberrima	66.06	0.00e+00	1019.00
IUUC-Ogu-078735	Oryza glumaepatula	65.80	0.00e+00	1018.00
IUUC-Oin-079422	Oryza indica	65.93	0.00e+00	1004.00
IUUC-Olo-080957	Oryza longistaminata	48.31	0.00e+00	645.00
IUUC-Ome-081455	Oryza meridionalis	65.80	0.00e+00	1018.00
IUUC-Oni-082690	Oryza nivara	66.06	0.00e+00	1005.00
IUUC-Opu-083157	Oryza punctata	66.19	0.00e+00	1020.00
IUUC-Oru-085058	Oryza rufipogon	65.93	0.00e+00	1004.00
IUUC-Osa-086000	Oryza sativa	65.93	0.00e+00	1004.00
IUUC-Ppa-096021	Physcomitrella patens	50.91	0.00e+00	732.00
IUUC-Pop-099966	Populus trichocarpa	80.18	0.00e+00	1231.00
IUUC-Ppe-101973	Prunus persica	77.98	0.00e+00	1188.00
IUUC-Smo-109219	Selaginella moellendorffii	50.13	0.00e+00	692.00
IUUC-Sit-110490	Setaria italica	64.51	0.00e+00	987.00
IUUC-Stu-111962	Solanum tuberosum	98.58	0.00e+00	1463.00
IUUC-Sbi-113974	Sorghum bicolor	55.96	0.00e+00	823.00
IUUC-Ssc-115521	Sus scrofa	29.73	3.00e-08	52.40
IUUC-Tca-121113	Theobroma cacao	79.53	0.00e+00	1231.00
IUUC-Tae-125341	Triticum aestivum	56.87	0.00e+00	792.00
IUUC-Tur-126573	Triticum urartu	65.54	0.00e+00	1023.00
IUUC-Vvi-131623	Vitis vinifera	79.53	0.00e+00	1268.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence