iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095381

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

SNF2 family DNA-dependent ATPase

Genbank Nucleotide ID

DS545124

Gene Name

CHR1504; PHYPADRAFT_145844

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S235_76V6	PP1S235_76V6.1	PP1S235_76V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.40e-08	35.5	75	119

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           ++C +C+ gg+    l++C+ C+ +fH +Cl ++  + +p+ + w CpkC 
   Q: 75   DFCSICHLGGD----LLCCDTCTAVFHLGCLDPP-MKVVPRGK-WSCPKCA 119
           79*********....*******************.99999997.******7 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MTKEDFMDHS VNEGGNGDEE YSLVTERLRQ RTNRKPIYVE EEEGMEGDEW EEEADEFEEE 60
EDEEKEVLKM EQSEDFCSIC HLGGDLLCCD TCTAVFHLGC LDPPMKVVPR GKWSCPKCAD 120

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Nucleotide Sequence
(Fasta)

ATGACTAAAG AGGACTTTAT GGACCATTCC GTGAACGAGG GTGGGAATGG AGACGAGGTA 60
TGTGAGCTTG CGTTAATTGT CACTCGCTGT GTTGTGATAT TGACTGTCGT GGAGTATTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR009462--DUF1086
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50013--CHROMO_2
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00385--Chromo
PF06461--DUF1086
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N

SMART

SM00298--CHROMO
SM00487--DEXDc
SM01146--DUF1086
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005524--F:ATP binding
GO:0008270--F:zinc ion binding

KEGG

ppp:PHYPADRAFT_145844

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011352	Astyanax mexicanus	41.06	0.00e+00	713.00
IUUC-Ete-032757	Echinops telfairi	41.71	6.00e-164	572.00
IUUC-Gma-043999	Glycine max	57.92	0.00e+00	1314.00
IUUC-Pab-097677	Pongo abelii	39.96	0.00e+00	693.00
IUUC-Tru-118648	Takifugu rubripes	41.80	0.00e+00	731.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence