iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005754

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

GL348719

Gene Name

UBP27; ARALYDRAFT_656075

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Al_scaffold_0007_130	Al_scaffold_0007_130	Al_scaffold_0007_130

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	8.40e-53	180.4	76	492

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle...kkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkalkkeaeefs 85
           Gl+NlgN C++N +LQ+L++++++r++l       + +++ e   e++ +l+ +l  l++el    s++++ spr+++ al ++a +f+
   Q: 76   GLQNLGNNCFLNVILQALASCKDFRSFLQWvleDARDSVAGE--LEEQLPLTYALSALLQELCtvGSRRSVSSPRKVMVALTDYATNFN 162
           9************************98877643444444444..89999*************88899999******************* PP
   S: 86   gyeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsde...............aeekkkkknkslisdlFqgqlksqikclec 159
            ++qqDa E l +l+++l+ee+       +   + +++++lsd+                   + k+ ++ +   F+g l s+++c +c
   Q: 163  LTSQQDAAEALLHLISSLQEEI-------VVCYRPSQSCNLSDIlfsrnlrmlapseglLGLMELKRWHKHLRGPFDGILGSTLMCRTC 244
           **********************.......556666666777777777779999999888667788899999****************** PP
   S: 160  dnvs.sreepfldlslpvp.gkeetkke.....slqdcLesftkeeelegenkyycekck............................. 212
            ++   +++ f +l+l+    +     +     +l++cL++f ++e++e+   y+c +c                              
   Q: 245  SSQIsLEFQFFHTLPLSPLlHNGGY--NimfgcTLENCLNKFLNAEKVEN---YFCYRCWhgaalkylsvigaaeidiemvrscggedq 328
           9876488888888888644233222..134677***************96...*******89999999999999999999999988888 PP
   S: 213  ................kkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfcts.................. 267
                           +++   k+l + +lP+ L+++ +R sf+     + k++ ++ fpl Ldls f+ +                  
   Q: 329  cdcktshhlqrmpwsnSYSHILKQLIIARLPKLLCIQVQRASFNM--FEEFKLSGHIAFPLVLDLSLFTPTsiglnieeriemsseyqk 415
           88888887777777777777*********************9977..6888***************88877788888888888888875 PP
   S: 268  peekqkekkkYeLiavvvHsGslssGHYvayvkn...........ekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           pe +  ++  Y+L+ vv H G ++sGHY++y              e+ +W+ ++Ds+V  v+e++vl    ++a +lfY+r
   Q: 416  PEAS-RKHGMYRLVTVVEHFGRTGSGHYTVYRSVrvpsqeeeedcEELCWFSISDSEVCRVSESDVLG---AEASLLFYER 492
           4443.349***********************999999988765555556*******************...********98 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MVSRRGSSDT KAIVCIFTDR IRFSNNWVSH LSFAGLLGAA GFVFAQQHGL FPNLNNLKLF 60
SGKEKDAGDD SVLVPGLQNL GNNCFLNVIL QALASCKDFR SFLQWVLEDA RDSVAGELEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTTTCTC GTAGAGGTTC TTCCGACACA AAGGCGATTG TGTGTATCTT CACAGATAGA 60
ATTAGGTTCT CCAACAACTG GGTTTCGCAT TTGTCTTTTG CTGGTCTACT TGGTGCTGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

aly:ARALYDRAFT_656075

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000204	Aegilops tauschii	36.89	6.00e-54	204.00
IUUC-Aml-001733	Ailuropoda melanoleuca	25.93	2.00e-20	93.20
IUUC-Atr-002510	Amborella trichopoda	44.59	3.00e-69	255.00
IUUC-Ath-007622	Arabidopsis thaliana	88.93	0.00e+00	899.00
IUUC-Acl-008136	Aspergillus clavatus	23.98	1.00e-20	94.40
IUUC-Afl-008729	Aspergillus flavus	23.94	2.00e-16	80.50
IUUC-Afu-009119	Aspergillus fumigatus	24.75	4.00e-14	72.80
IUUC-Ani-009286	Aspergillus nidulans	23.91	2.00e-17	83.60
IUUC-Ang-009521	Aspergillus niger	24.44	1.00e-17	84.30
IUUC-Aor-009965	Aspergillus oryzae	24.05	2.00e-17	83.60
IUUC-Ate-010591	Aspergillus terreus	26.79	4.00e-24	105.00
IUUC-Ame-010896	Astyanax mexicanus	26.34	1.00e-20	94.00
IUUC-Bgr-012133	Blumeria graminis	26.05	2.00e-14	73.60
IUUC-Bta-012321	Bos taurus	25.05	3.00e-25	108.00
IUUC-Bci-013590	Botrytis cinerea	27.02	2.00e-20	94.00
IUUC-Bdi-014795	Brachypodium distachyon	37.13	1.00e-40	160.00
IUUC-Bol-015637	Brassica oleracea	75.55	0.00e+00	679.00
IUUC-Bra-016801	Brassica rapa	73.36	0.00e+00	666.00
IUUC-Cja-018826	Callithrix jacchus	25.21	8.00e-24	104.00
IUUC-Cfa-021206	Canis familiaris	25.52	1.00e-23	103.00
IUUC-Cpo-021343	Cavia porcellus	24.22	4.00e-23	102.00
IUUC-Csa-023419	Chlorocebus sabaeus	26.43	9.00e-23	100.00
IUUC-Cgl-026621	Colletotrichum gloeosporioides	25.00	4.00e-14	72.80
IUUC-Cne-027061	Cryptococcus neoformans	21.61	2.00e-12	67.40
IUUC-Dre-027563	Danio rerio	27.33	1.00e-24	107.00
IUUC-Dno-029929	Dasypus novemcinctus	27.31	7.00e-23	101.00
IUUC-Dor-030166	Dipodomys ordii	25.22	9.00e-18	84.30
IUUC-Ete-032634	Echinops telfairi	25.44	5.00e-20	92.00
IUUC-Eca-033968	Equus caballus	26.46	4.00e-25	108.00
IUUC-Fca-036525	Felis catus	26.87	5.00e-23	101.00
IUUC-Fso-038309	Fusarium solani	23.43	2.00e-17	83.20
IUUC-Gmo-038726	Gadus morhua	23.76	1.00e-20	94.00
IUUC-Gma-042890	Glycine max	49.85	6.00e-87	314.00
IUUC-Ggo-045021	Gorilla gorilla	26.81	2.00e-22	100.00
IUUC-Hsa-045832	Homo sapiens	26.81	2.00e-22	100.00
IUUC-Hvu-047422	Hordeum vulgare	43.80	1.00e-22	97.40
IUUC-Itr-048392	Ictidomys tridecemlineatus	25.26	5.00e-24	104.00
IUUC-Kpa-049268	Komagataella pastoris	22.47	6.00e-17	81.60
IUUC-Lch-050662	Latimeria chalumnae	26.18	7.00e-18	84.30
IUUC-Lpe-051078	Leersia perrieri	36.71	2.00e-72	265.00
IUUC-Loc-052611	Lepisosteus oculatus	24.38	2.00e-21	96.30
IUUC-Lma-053048	Leptosphaeria maculans	25.32	2.00e-20	93.60
IUUC-Laf-053752	Loxodonta africana	25.83	9.00e-26	110.00
IUUC-Mcc-054892	Macaca mulatta	26.43	1.00e-22	100.00
IUUC-Mor-057143	Magnaporthe oryzae	23.57	7.00e-13	68.60
IUUC-Mtr-057976	Medicago truncatula	49.28	5.00e-93	334.00
IUUC-Mla-058970	Melampsora laricipopulina	25.66	7.00e-21	94.70
IUUC-Mga-059543	Meleagris gallopavo	25.37	4.00e-25	108.00
IUUC-Mmr-061534	Microcebus murinus	26.04	3.00e-25	108.00
IUUC-Mmu-063673	Mus musculus	26.42	4.00e-27	115.00
IUUC-Mac-065296	Musa acuminata	46.52	2.00e-37	148.00
IUUC-Mpu-066328	Mustela putorius furo	26.72	6.00e-24	104.00
IUUC-Mlu-067938	Myotis lucifugus	25.83	5.00e-26	111.00
IUUC-Nfi-068306	Neosartorya fischeri	25.00	4.00e-18	85.90
IUUC-Ncr-068741	Neurospora crassa	24.82	6.00e-11	62.40
IUUC-Nle-069426	Nomascus leucogenys	24.32	8.00e-17	80.90
IUUC-Oan-072916	Ornithorhynchus anatinus	25.79	3.00e-22	99.40
IUUC-Oba-075765	Oryza barthii	37.88	4.00e-72	264.00
IUUC-Obr-076005	Oryza brachyantha	40.91	8.00e-82	296.00
IUUC-Ogl-077916	Oryza glaberrima	39.83	2.00e-80	292.00
IUUC-Ogu-078263	Oryza glumaepatula	37.93	6.00e-72	264.00
IUUC-Oin-080096	Oryza indica	36.90	2.00e-54	205.00
IUUC-Olo-080702	Oryza longistaminata	34.57	7.00e-31	129.00
IUUC-Ome-081928	Oryza meridionalis	38.97	2.00e-74	272.00
IUUC-Oni-082424	Oryza nivara	37.93	7.00e-71	260.00
IUUC-Opu-083371	Oryza punctata	40.08	6.00e-77	281.00
IUUC-Oru-085117	Oryza rufipogon	37.93	7.00e-71	260.00
IUUC-Ola-087429	Oryzias latipes	25.32	2.00e-19	89.70
IUUC-Oga-087981	Otolemur garnettii	25.42	2.00e-24	106.00
IUUC-Oar-089927	Ovis aries	24.79	1.00e-24	107.00
IUUC-Ptr-090878	Pan troglodytes	26.81	2.00e-22	100.00
IUUC-Pan-092698	Papio anubis	26.43	1.00e-22	100.00
IUUC-Psi-093451	Pelodiscus sinensis	25.26	2.00e-25	109.00
IUUC-Pno-094855	Phaeosphaeria nodorum	31.03	8.00e-12	63.90
IUUC-Ppa-096015	Physcomitrella patens	32.07	5.00e-37	149.00
IUUC-Pab-098676	Pongo abelii	26.55	2.00e-21	96.70
IUUC-Pop-099432	Populus trichocarpa	46.10	2.00e-53	202.00
IUUC-Ppe-101898	Prunus persica	53.07	3.00e-92	332.00
IUUC-Pva-103018	Pteropus vampyrus	25.87	1.00e-22	100.00
IUUC-Ptt-103779	Puccinia triticina	24.65	3.00e-12	66.60
IUUC-Pte-104330	Pyrenophora teres	23.33	2.00e-16	80.10
IUUC-Pyt-104518	Pyrenophora triticirepentis	23.37	3.00e-19	89.70
IUUC-Rno-105708	Rattus norvegicus	25.87	4.00e-25	108.00
IUUC-Sha-106971	Sarcophilus harrisii	24.69	3.00e-24	105.00
IUUC-Ssl-108648	Sclerotinia sclerotiorum	25.49	5.00e-16	79.00
IUUC-Smo-109086	Selaginella moellendorffii	38.75	5.00e-29	120.00
IUUC-Sit-110442	Setaria italica	42.70	2.00e-76	279.00
IUUC-Sly-110928	Solanum lycopersicum	47.90	7.00e-63	233.00
IUUC-Stu-112223	Solanum tuberosum	47.57	3.00e-58	218.00
IUUC-Sbi-113851	Sorghum bicolor	39.86	2.00e-41	161.00
IUUC-Ssc-116397	Sus scrofa	24.58	1.00e-22	100.00
IUUC-Tgu-117446	Taeniopygia guttata	26.42	4.00e-26	112.00
IUUC-Tru-118268	Takifugu rubripes	23.25	8.00e-20	90.90
IUUC-Tni-119735	Tetraodon nigroviridis	23.13	2.00e-14	73.20
IUUC-Tca-121660	Theobroma cacao	55.56	3.00e-95	342.00
IUUC-Tre-122225	Trichoderma reesei	23.38	1.00e-11	64.70
IUUC-Tvi-122277	Trichoderma virens	22.80	2.00e-12	67.00
IUUC-Tae-125383	Triticum aestivum	41.67	1.00e-76	279.00
IUUC-Tur-126458	Triticum urartu	43.50	5.00e-79	287.00
IUUC-Tme-126935	Tuber melanosporum	28.02	5.00e-14	72.40
IUUC-Ttr-129273	Tursiops truncatus	24.63	2.00e-24	106.00
IUUC-Uma-129375	Ustilago maydis	23.56	4.00e-18	86.30
IUUC-Vda-129789	Verticillium dahliae	23.23	4.00e-13	69.70
IUUC-Vvi-131177	Vitis vinifera	50.82	7.00e-92	330.00
IUUC-Xtr-132374	Xenopus tropicalis	26.29	2.00e-28	119.00
IUUC-Xma-133267	Xiphophorus maculatus	24.59	2.00e-18	86.70
IUUC-Yli-134571	Yarrowia lipolytica	22.42	7.00e-16	78.20
IUUC-Zma-135796	Zea mays	43.75	2.00e-82	298.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence