iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099902

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin-conjugating enzyme family protein

Genbank Nucleotide ID

CM000340

Gene Name

POPTRDRAFT_859165; POPTR_0004s18210g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0004s18210	POPTR_0004s18210.1	POPTR_0004s18210.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	1.80e-24	87.2	712	848

Active Site

Position(s)	Description	Evidence
793	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 2    lkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltk..ifhPnvyenGkvClsilk... 87
           ++++ + l+++ p++i +++ ++  ++ ++++i+G  +tpY++g+F +++++p++YP  PP+  + +   + +Pn+ye+Gk+Cls+l+   
   Q: 712  VQQDWNILQNNLPDEIYVRVYED-RMDLLRATIIGAYGTPYQDGLFFFDFHLPREYPDVPPSAYYHSGgwRINPNLYEEGKLCLSLLNtwt 801
           6899999****************.5******************************************98899***************7777 PP
   S: 88   ..eeekWspalsvesvllsiqsll..aepnpesplneeaaellkknr 130
              +e W++++s+ +vl+s+q l+  ++p+++++ ++++  + + ++
   Q: 802  grGNEVWHSTSSILQVLVSLQGLVlnSRPYFNEAGYDKQIGTAEGEK 848
           7789*******************98777****999988875555444 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MHNVVGVVSE VAGESDSDGS IMDDDDEDED DDDDDDEDEC DVDEDAGNEG ADDDGNDNTN 60
GDRSEGSDNY KIWMGDVKPV QHVNDVTVID RGFLHGDYVA SASDPTGQVG VVVDVNISVD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCACAATG TGGTTGGGGT AGTGAGTGAA GTTGCTGGTG AGTCAGATTC GGATGGAAGT 60
ATTATGGATG ATGATGATGA GGATGAGGAC GACGACGACG ACGATGACGA AGATGAGTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000608--UBQ-conjugat_E2
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005737--C:cytoplasm
GO:0061630--F:ubiquitin protein ligase activity
GO:0031625--F:ubiquitin protein ligase binding

KEGG

pop:POPTR_0004s18210g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002469	Amborella trichopoda	53.42	0.00e+00	661.00
IUUC-Aor-010121	Aspergillus oryzae	48.98	5.00e-36	146.00
IUUC-Gma-043359	Glycine max	63.58	0.00e+00	1037.00
IUUC-Mac-065339	Musa acuminata	53.66	0.00e+00	855.00
IUUC-Pno-095065	Phaeosphaeria nodorum	50.00	8.00e-32	132.00
IUUC-Pte-104381	Pyrenophora teres	44.00	2.00e-37	150.00
IUUC-Pyt-104607	Pyrenophora triticirepentis	44.57	2.00e-37	151.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence