iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098894

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000339

Gene Name

POPTRDRAFT_712346; POPTR_0003s13080g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0003s13080	POPTR_0003s13080.1	POPTR_0003s13080.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-07	33.4	94	137

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdg.plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f   + +  ++ +C H+fh+ Cl +w     + + +++CPlCr
   Q: 94   CAVCLYEFeesD-EiRRLANCRHIFHKCCLDRW-----MGYDQITCPLCR 137
           ********6632.2234566*************.....8**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGFPVGYSEI VLPKLLLHTL SFLGFIRKLI NTLFHCIGLP DFLEPGISSS SSTENTPPFR 60
VPDFHSHSVS ALLIREILPV VKFSELVDPS ADSCAVCLYE FEESDEIRRL ANCRHIFHKC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTTTTC CTGTAGGCTA TTCAGAAATA GTTCTCCCAA AACTCCTCCT CCACACACTT 60
TCTTTCCTGG GTTTCATTAG AAAACTGATA AACACTCTCT TTCACTGCAT AGGTCTCCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0003s13080g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002812	Amborella trichopoda	61.08	4.00e-46	176.00
IUUC-Aly-006338	Arabidopsis lyrata	59.75	8.00e-52	195.00
IUUC-Ath-006983	Arabidopsis thaliana	59.75	3.00e-52	196.00
IUUC-Ame-011687	Astyanax mexicanus	47.76	3.00e-10	59.70
IUUC-Bdi-014238	Brachypodium distachyon	41.95	3.00e-24	104.00
IUUC-Bol-016293	Brassica oleracea	65.16	3.00e-48	183.00
IUUC-Bra-018086	Brassica rapa	65.38	2.00e-49	187.00
IUUC-Csv-026018	Ciona savignyi	35.48	1.00e-08	53.10
IUUC-Gma-042994	Glycine max	62.65	9.00e-51	191.00
IUUC-Hvu-047847	Hordeum vulgare	50.00	2.00e-20	91.70
IUUC-Lpe-050715	Leersia perrieri	44.53	2.00e-24	105.00
IUUC-Mtr-057802	Medicago truncatula	68.29	2.00e-60	223.00
IUUC-Mac-065105	Musa acuminata	44.24	4.00e-35	140.00
IUUC-Obr-076564	Oryza brachyantha	45.69	3.00e-24	102.00
IUUC-Ogl-077056	Oryza glaberrima	42.01	1.00e-25	108.00
IUUC-Opu-083418	Oryza punctata	42.35	5.00e-26	110.00
IUUC-Ppe-101613	Prunus persica	68.10	2.00e-59	220.00
IUUC-Pgr-103545	Puccinia graminis	40.00	7.00e-10	57.00
IUUC-Sly-111431	Solanum lycopersicum	67.66	2.00e-53	200.00
IUUC-Stu-112490	Solanum tuberosum	67.66	4.00e-53	199.00
IUUC-Sbi-114509	Sorghum bicolor	55.17	2.00e-23	101.00
IUUC-Tca-121057	Theobroma cacao	66.29	2.00e-53	201.00
IUUC-Tae-123430	Triticum aestivum	44.03	7.00e-25	106.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence