iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121698

Ensembl Protein ID

EOY34510

UniProt Accession

A0A061GYG0; A0A061GYG0_THECC

Genbank Protein ID

EOY34508.1; EOY34509.1; EOY34510.1

Protein Name

PGPD14 isoform 1

Genbank Nucleotide ID

CM001887; CM001887; CM001887

Gene Name

TCM_042163

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_042163	EOY34511	EOY34511
TCM_042163	EOY34510	EOY34510

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.30e-07	31.7	172	214

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf....kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C++C+e +    +d   vlpCgH++h++Cl  +     ++    +CP+C
   Q: 172  CPVCFEFLfdtmED-ITVLPCGHTMHLECLREM-----EQHYLYSCPVC 214
           ****9988555344.779************555.....3444789**** PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MDGGCETKLS TDELESVEFG NQNAALMEIG LGNHGCLHYR RRCKIRAPCC NEIFDCRHCH 60
NEAKNSLECN PLEQHEIPRH EVEKVICSLC DTEQDVQQYC INCGVCMGKY FCAKCKFFDD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTATTGGAGA ACCGGCGCGT GAACAATACT ATTTGCTGTT GGCGCTTGAG ATACAAAACC 60
TTCATTCCAG ACCATAAAAC TTCATCCCAA AAATGCCCCA AAAAGGGCGT TGAGAACTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR004039--Rubredoxin-type_fold
IPR027370--Znf-RING_LisH
IPR008913--Znf_CHY
IPR017921--Znf_CTCHY
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51266--ZF_CHY
PS51270--ZF_CTCHY
PS50089--ZF_RING_2

Pfam

PF05495--zf-CHY
PF13445--zf-RING_UBOX

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding
GO:1902456--P:regulation of stomatal opening

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006141	Arabidopsis lyrata	70.61	1.00e-117	414.00
IUUC-Ath-007628	Arabidopsis thaliana	71.33	2.00e-119	420.00
IUUC-Bdi-014852	Brachypodium distachyon	70.82	3.00e-112	397.00
IUUC-Bol-016321	Brassica oleracea	67.96	8.00e-120	422.00
IUUC-Bra-018009	Brassica rapa	70.59	3.00e-118	416.00
IUUC-Gma-043022	Glycine max	73.90	2.00e-126	443.00
IUUC-Hvu-047256	Hordeum vulgare	69.06	4.00e-113	399.00
IUUC-Lpe-051493	Leersia perrieri	69.20	6.00e-113	399.00
IUUC-Oba-075821	Oryza barthii	62.71	3.00e-111	394.00
IUUC-Ogl-077866	Oryza glaberrima	70.04	3.00e-109	387.00
IUUC-Ogu-078001	Oryza glumaepatula	62.71	4.00e-111	394.00
IUUC-Oin-079627	Oryza indica	63.36	4.00e-113	400.00
IUUC-Oni-082329	Oryza nivara	63.36	1.00e-112	399.00
IUUC-Oru-085088	Oryza rufipogon	63.36	1.00e-112	399.00
IUUC-Ppa-095679	Physcomitrella patens	63.16	2.00e-103	368.00
IUUC-Pop-099303	Populus trichocarpa	81.53	2.00e-143	500.00
IUUC-Sit-110156	Setaria italica	69.58	2.00e-112	397.00
IUUC-Sbi-113777	Sorghum bicolor	68.06	9.00e-112	395.00
IUUC-Tae-124038	Triticum aestivum	70.57	1.00e-114	404.00
IUUC-Vvi-131152	Vitis vinifera	75.00	7.00e-134	468.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence