iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tgu-117205

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABQF01019052

Gene Name

RLIM

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTGUG00000005799.1	ENSTGUT00000006023.1	ENSTGUP00000005964.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.00e-07	30.7	541	582

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C +++ +g  ++ lpC H +h +C+ +w       s + +CP+Cr
   Q: 541  CSVCITEYTEGnkLRKLPCSHEYHVHCIDRW------LSENSTCPICR 582
           9*******5554499****************......**********8 PP

Organism

Taeniopygia guttata

Protein Sequence
(Fasta)

MESSDSSDKG SIDQSEAQRQ SQLDRLDREE AFYQFVNNLS EEDYRLMRDN NLLGTPGEIT 60
EEELLRRLHQ VKEGPPQQNS DENRGAESAE DVSNGDSIID WLNSVRQTGN TTRSGQRGNQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAAGCT CAGATTCTAG TGATAAAGGA AGTATTGATC AATCAGAAGC CCAACGTCAG 60
AGCCAGCTGG ATCGGTTAGA TCGAGAAGAA GCTTTCTATC AGTTTGTGAA CAACCTGAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043433--P:negative regulation of sequence-specific DNA binding transcription factor activity
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

tgu:100222739

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001407	Ailuropoda melanoleuca	78.62	5.00e-153	534.00
IUUC-Atr-002539	Amborella trichopoda	44.29	3.00e-15	75.50
IUUC-Apl-003969	Anas platyrhynchos	94.51	0.00e+00	965.00
IUUC-Aca-005377	Anolis carolinensis	81.97	4.00e-164	570.00
IUUC-Ame-011097	Astyanax mexicanus	59.50	3.00e-109	389.00
IUUC-Bta-013113	Bos taurus	79.76	1.00e-154	539.00
IUUC-Bdi-014392	Brachypodium distachyon	47.06	3.00e-14	71.20
IUUC-Bol-015085	Brassica oleracea	43.01	2.00e-16	79.70
IUUC-Bra-017624	Brassica rapa	43.01	2.00e-16	79.70
IUUC-Cja-018860	Callithrix jacchus	78.28	2.00e-148	519.00
IUUC-Cfa-020358	Canis familiaris	78.40	3.00e-149	521.00
IUUC-Cpo-021533	Cavia porcellus	77.69	2.00e-134	471.00
IUUC-Cre-022755	Chlamydomonas reinhardtii	44.68	8.00e-14	67.40
IUUC-Csa-023242	Chlorocebus sabaeus	75.96	2.00e-140	492.00
IUUC-Cho-024536	Choloepus hoffmanni	70.55	3.00e-124	438.00
IUUC-Cne-026941	Cryptococcus neoformans	34.94	1.00e-10	61.60
IUUC-Dre-027894	Danio rerio	59.10	1.00e-168	586.00
IUUC-Dno-029606	Dasypus novemcinctus	78.96	2.00e-159	555.00
IUUC-Dor-031042	Dipodomys ordii	72.16	2.00e-138	485.00
IUUC-Ete-033099	Echinops telfairi	74.43	3.00e-139	488.00
IUUC-Eca-033976	Equus caballus	78.05	7.00e-158	550.00
IUUC-Eeu-034964	Erinaceus europaeus	69.01	2.00e-180	625.00
IUUC-Fca-035662	Felis catus	78.62	5.00e-153	534.00
IUUC-Fal-036996	Ficedula albicollis	93.55	0.00e+00	926.00
IUUC-Gga-040816	Gallus gallus	93.61	0.00e+00	943.00
IUUC-Gac-041767	Gasterosteus aculeatus	61.70	1.00e-99	356.00
IUUC-Gma-043292	Glycine max	47.37	2.00e-16	79.70
IUUC-Ggo-044754	Gorilla gorilla	78.20	4.00e-155	541.00
IUUC-Hsa-045776	Homo sapiens	78.20	4.00e-155	541.00
IUUC-Hvu-047745	Hordeum vulgare	52.94	1.00e-14	74.30
IUUC-Itr-048044	Ictidomys tridecemlineatus	77.32	2.00e-157	548.00
IUUC-Lch-050178	Latimeria chalumnae	71.38	0.00e+00	677.00
IUUC-Lpe-051680	Leersia perrieri	44.16	1.00e-14	73.90
IUUC-Loc-052124	Lepisosteus oculatus	58.54	2.00e-160	558.00
IUUC-Laf-054328	Loxodonta africana	79.19	1.00e-154	539.00
IUUC-Mcc-054739	Macaca mulatta	78.43	4.00e-156	544.00
IUUC-Meu-056359	Macropus eugenii	77.23	0.00e+00	776.00
IUUC-Mtr-058167	Medicago truncatula	47.37	1.00e-15	76.60
IUUC-Mga-059838	Meleagris gallopavo	94.12	0.00e+00	959.00
IUUC-Mmr-060608	Microcebus murinus	78.67	4.00e-148	517.00
IUUC-Mdo-061961	Monodelphis domestica	80.18	4.00e-156	544.00
IUUC-Mmu-064278	Mus musculus	72.64	6.00e-133	467.00
IUUC-Mac-064703	Musa acuminata	44.44	9.00e-15	73.90
IUUC-Mpu-066258	Mustela putorius furo	75.85	8.00e-112	397.00
IUUC-Mlu-066930	Myotis lucifugus	79.37	4.00e-162	564.00
IUUC-Nle-069311	Nomascus leucogenys	78.20	4.00e-155	541.00
IUUC-Opr-071124	Ochotona princeps	75.13	1.00e-62	233.00
IUUC-Ont-071511	Oreochromis niloticus	61.58	6.00e-99	354.00
IUUC-Oan-073036	Ornithorhynchus anatinus	81.26	5.00e-156	544.00
IUUC-Ocu-073795	Oryctolagus cuniculus	74.55	0.00e+00	728.00
IUUC-Oba-075403	Oryza barthii	44.16	1.00e-14	73.90
IUUC-Obr-076503	Oryza brachyantha	44.16	2.00e-14	73.20
IUUC-Ogl-077574	Oryza glaberrima	44.16	1.00e-14	73.90
IUUC-Ogu-077986	Oryza glumaepatula	44.16	1.00e-14	73.90
IUUC-Oin-079091	Oryza indica	44.16	1.00e-14	73.90
IUUC-Ome-081627	Oryza meridionalis	44.16	1.00e-14	73.90
IUUC-Oni-082260	Oryza nivara	44.16	2.00e-14	73.90
IUUC-Opu-083578	Oryza punctata	44.16	1.00e-14	73.90
IUUC-Oru-084794	Oryza rufipogon	44.16	1.00e-14	73.90
IUUC-Osa-085348	Oryza sativa	44.16	1.00e-14	73.90
IUUC-Ola-087461	Oryzias latipes	68.26	8.00e-92	330.00
IUUC-Oga-088022	Otolemur garnettii	77.30	0.00e+00	754.00
IUUC-Oar-089348	Ovis aries	80.24	4.00e-155	541.00
IUUC-Ptr-090604	Pan troglodytes	77.98	2.00e-155	541.00
IUUC-Pan-092322	Papio anubis	78.43	4.00e-156	544.00
IUUC-Psi-093936	Pelodiscus sinensis	86.29	0.00e+00	842.00
IUUC-Ppa-095197	Physcomitrella patens	46.58	1.00e-16	80.90
IUUC-Pfo-096616	Poecilia formosa	63.31	7.00e-93	334.00
IUUC-Pab-098671	Pongo abelii	77.98	1.00e-154	539.00
IUUC-Pop-099808	Populus trichocarpa	45.95	5.00e-16	78.20
IUUC-Pca-100263	Procavia capensis	74.47	0.00e+00	706.00
IUUC-Ppe-101995	Prunus persica	46.58	1.00e-15	77.00
IUUC-Pva-102709	Pteropus vampyrus	78.05	5.00e-142	497.00
IUUC-Rno-105759	Rattus norvegicus	75.06	4.00e-135	474.00
IUUC-Sha-106792	Sarcophilus harrisii	75.32	0.00e+00	715.00
IUUC-Sly-111747	Solanum lycopersicum	62.86	1.00e-12	67.00
IUUC-Stu-112609	Solanum tuberosum	47.22	1.00e-16	79.70
IUUC-Sar-113271	Sorex araneus	73.54	1.00e-141	496.00
IUUC-Sbi-114435	Sorghum bicolor	44.16	2.00e-14	73.60
IUUC-Ssc-115738	Sus scrofa	78.17	4.00e-155	541.00
IUUC-Tru-118123	Takifugu rubripes	88.57	1.00e-55	210.00
IUUC-Tsy-119421	Tarsius syrichta	78.40	1.00e-161	562.00
IUUC-Tni-120299	Tetraodon nigroviridis	66.67	8.00e-87	313.00
IUUC-Tca-121367	Theobroma cacao	47.37	2.00e-16	79.30
IUUC-Tae-125871	Triticum aestivum	34.07	5.00e-16	77.40
IUUC-Tur-126084	Triticum urartu	48.89	2.00e-13	72.00
IUUC-Tbe-127543	Tupaia belangeri	76.31	0.00e+00	785.00
IUUC-Vpa-130058	Vicugna pacos	78.62	1.00e-152	533.00
IUUC-Vvi-131093	Vitis vinifera	47.37	1.00e-16	80.10
IUUC-Xtr-132663	Xenopus tropicalis	65.59	2.00e-167	581.00
IUUC-Xma-133076	Xiphophorus maculatus	62.03	6.00e-100	357.00
IUUC-Yli-134448	Yarrowia lipolytica	35.29	2.00e-10	58.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence