iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111824

Ensembl Protein ID

Solyc12g096040.1.1

UniProt Accession

K4DH77; K4DH77_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc12g096040.1	Solyc12g096040.1.1	Solyc12g096040.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.80e-08	34.1	198	248

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           + C  Cge++++++  ++C++C+ wfH +C+k++     +  +++ Cp+C+s
   Q: 198  TLCGACGENYASDEFWICCDICEVWFHGKCVKIT-PARAEHIKQYKCPSCTS 248
           68************99******************.666666677******86 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MDGAQQYNPR TVEEVFRDFK GRRAALVKAL TTDVEEFYQQ CDPEKENLCL YGFPSESWEV 60
NLPAEEVPPE LPEPALGINF ARDGMQEKDW LSLVAVHSDA WLLSVAFYFG ARFGFDRADR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATGGAG CTCAGCAGTA CAATCCTCGA ACTGTTGAAG AAGTGTTTAG AGATTTTAAG 60
GGTCGAAGAG CTGCACTTGT CAAAGCCCTT ACTACTGGTA AAAAAAAAAA ACTAAACTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR021998--Alfin
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF12165--Alfin
PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding
GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002983	Amborella trichopoda	80.54	6.00e-97	345.00
IUUC-Bdi-014599	Brachypodium distachyon	68.80	4.00e-88	316.00
IUUC-Gma-043342	Glycine max	78.74	1.00e-92	331.00
IUUC-Kpa-049384	Komagataella pastoris	37.50	2.00e-07	50.10
IUUC-Mtr-057868	Medicago truncatula	73.18	7.00e-90	322.00
IUUC-Ome-082006	Oryza meridionalis	69.57	4.00e-82	296.00
IUUC-Pop-099768	Populus trichocarpa	79.38	5.00e-95	339.00
IUUC-Ppe-101390	Prunus persica	79.53	1.00e-95	341.00
IUUC-Sit-110822	Setaria italica	84.89	1.00e-57	215.00
IUUC-Tca-121679	Theobroma cacao	79.13	4.00e-91	326.00
IUUC-Tae-125571	Triticum aestivum	66.18	2.00e-85	307.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence