iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017984

Ensembl Protein ID

Bra020714.1-P

UniProt Accession

M4DW20; M4DW20_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra020714	Bra020714.1	Bra020714.1-P

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	94.84	6.00e-83	302.00	IUUC-Ath-007127

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSEKRIGMVE KSNNKRQRVN LVPTFSINDH HDVLVEILRR LDGPSLCSAA CVCRLWSAVA 60
RNDSIWEELC FRQVSPRPSL SLRSVVSALG GYRCLYFLCI RPVLARLPKI IWSRDQLQLS 120

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Nucleotide Sequence
(Fasta)

ATGTCGGAGA AACGAATCGG TATGGTCGAG AAAAGTAACA ACAAGAGACA ACGAGTGAAT 60
CTTGTTCCCA CGTTCTCCAT CAACGACCAC CACGACGTTC TTGTTGAAAT CCTCCGGCGA 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom

Pfam

PF12937--F-box-like

SMART

SM00256--FBOX

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002846	Amborella trichopoda	37.66	1.00e-24	105.00
IUUC-Apl-003195	Anas platyrhynchos	41.46	1.00e-03	35.40
IUUC-Aca-004788	Anolis carolinensis	32.73	1.00e-03	35.40
IUUC-Aly-005539	Arabidopsis lyrata	95.51	4.00e-84	302.00
IUUC-Ath-007127	Arabidopsis thaliana	94.84	4.00e-84	302.00
IUUC-Bdi-014290	Brachypodium distachyon	57.38	2.00e-15	75.10
IUUC-Bol-015233	Brassica oleracea	98.72	2.00e-86	310.00
IUUC-Cja-019552	Callithrix jacchus	34.85	2.00e-04	37.70
IUUC-Gac-041831	Gasterosteus aculeatus	34.38	3.00e-04	37.40
IUUC-Gma-043632	Glycine max	58.57	2.00e-39	154.00
IUUC-Lpe-050816	Leersia perrieri	48.03	1.00e-06	45.80
IUUC-Loc-052597	Lepisosteus oculatus	41.46	1.00e-04	38.90
IUUC-Laf-054453	Loxodonta africana	48.78	3.00e-05	40.40
IUUC-Mtr-057946	Medicago truncatula	56.52	2.00e-33	134.00
IUUC-Ont-071309	Oreochromis niloticus	39.02	1.00e-03	35.40
IUUC-Ogl-077474	Oryza glaberrima	50.00	8.00e-07	46.20
IUUC-Ogu-079029	Oryza glumaepatula	50.00	8.00e-07	46.20
IUUC-Oin-080121	Oryza indica	50.00	8.00e-07	46.20
IUUC-Ome-081968	Oryza meridionalis	65.31	3.00e-05	39.30
IUUC-Oni-082552	Oryza nivara	50.00	8.00e-07	46.20
IUUC-Opu-083746	Oryza punctata	50.35	3.00e-09	54.30
IUUC-Oru-084658	Oryza rufipogon	50.00	8.00e-07	46.20
IUUC-Osa-086295	Oryza sativa	50.00	8.00e-07	46.20
IUUC-Olu-087621	Ostreococcus lucimarinus	31.34	4.00e-04	40.40
IUUC-Ppa-095448	Physcomitrella patens	26.50	6.00e-04	38.10
IUUC-Pab-097968	Pongo abelii	34.92	3.00e-04	37.40
IUUC-Pop-099566	Populus trichocarpa	61.11	2.00e-36	144.00
IUUC-Pca-100414	Procavia capensis	41.46	1.00e-03	34.70
IUUC-Ppe-102106	Prunus persica	62.10	1.00e-34	138.00
IUUC-Pva-102518	Pteropus vampyrus	31.71	2.00e-03	34.30
IUUC-Rno-106002	Rattus norvegicus	35.48	2.00e-04	38.10
IUUC-Sly-111364	Solanum lycopersicum	49.70	6.00e-34	135.00
IUUC-Stu-112502	Solanum tuberosum	50.62	3.00e-34	137.00
IUUC-Sbi-114231	Sorghum bicolor	65.31	5.00e-05	40.40
IUUC-Tae-124891	Triticum aestivum	62.26	3.00e-15	74.30
IUUC-Vvi-130926	Vitis vinifera	57.62	9.00e-36	142.00
IUUC-Xma-133035	Xiphophorus maculatus	32.39	4.00e-04	38.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence