iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Nle-069004

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADFV01133198

Gene Name

USP42

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSNLEG00000001092.1	ENSNLET00000001411.1	ENSNLEP00000001333.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.90e-81	273.8	112	411

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeq 89
           Gl+NlgNtC+ N++LQcL+ +p+l++++l+ ++++++++     +  ++++++q  +++ +++   +++p  +++ ++++a++f+  +q
   Q: 112  GLQNLGNTCFANAALQCLTYTPPLANYMLShEHSKTCHA-----EGFCMMCTMQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQ 195
           9*****************************445555544.....578****************************************** PP
   S: 90   qDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpg 178
           +Da+Efl++ +d++++++                  l+ +++ + +++ ++l+ ++F+g l+s++kcl+c+ vs +++p ld++l+++ 
   Q: 196  EDAHEFLQYTVDAMQKAC------------------LNGSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA 266
           ******************..................3344567789999**************************************** PP
   S: 179  keetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfcts 267
            +     s++++Le+f+k+e+l+gen y+c+kckk + a+k++++++ ++vL+l LkRf    ++    ki k v++p+ Ld++p++++
   Q: 267  AQ-----SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRF----ANFTGGKIAKDVKYPEYLDIRPYMSQ 346
           **.....9***************************************************....668889******************** PP
   S: 268  peekqkekkkYeLiavvvHsG.slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           p+ +   +  Y L+av+vH+G +++ GHY++y+k ++g W++++Ds V++++  +vl+   ++aYvlfY r
   Q: 347  PNGE---PIVYVLYAVLVHTGfNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLS---QQAYVLFYIR 411
           9977...8**************************************************...********87 PP

Organism

Nomascus leucogenys

Protein Sequence
(Fasta)

MTIVDKASES SDPSAYQNQP GSSEAVSPGD MDAGSASWGA VSSLNDVSNH TLSLGPVPGA 60
VVYSSSSVPD KSKPSPQKDQ ALGDGIAPPQ KVLFPSEKIC LKWQQTHRVG AGLQNLGNTC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGAGTTGAA CAATGACCAT AGTTGACAAA GCTTCTGAAT CTTCAGACCC ATCAGCCTAT 60
CAGAATCAGC CTGGCAGCTC TGAGGCAGTC TCACCTGGAG ACATGGATGC AGGTTCTGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

nle:100603534

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000401	Aegilops tauschii	39.21	5.00e-71	262.00
IUUC-Aml-002303	Ailuropoda melanoleuca	73.41	0.00e+00	1401.00
IUUC-Atr-003102	Amborella trichopoda	46.91	1.00e-85	311.00
IUUC-Apl-003459	Anas platyrhynchos	55.08	0.00e+00	728.00
IUUC-Aca-004440	Anolis carolinensis	54.02	0.00e+00	979.00
IUUC-Aly-006389	Arabidopsis lyrata	42.36	1.00e-76	281.00
IUUC-Ath-006710	Arabidopsis thaliana	42.36	2.00e-76	280.00
IUUC-Ago-007836	Ashbya gossypii	26.44	2.00e-34	140.00
IUUC-Ame-011358	Astyanax mexicanus	67.92	0.00e+00	672.00
IUUC-Bta-012803	Bos taurus	72.22	0.00e+00	1591.00
IUUC-Bdi-014036	Brachypodium distachyon	44.05	3.00e-81	296.00
IUUC-Bol-015996	Brassica oleracea	39.13	4.00e-82	299.00
IUUC-Bra-016634	Brassica rapa	43.31	2.00e-82	300.00
IUUC-Cja-019199	Callithrix jacchus	91.14	0.00e+00	2019.00
IUUC-Cfa-020597	Canis familiaris	76.29	0.00e+00	1659.00
IUUC-Cpo-021945	Cavia porcellus	70.96	0.00e+00	1571.00
IUUC-Csa-023485	Chlorocebus sabaeus	95.52	0.00e+00	2090.00
IUUC-Cho-024575	Choloepus hoffmanni	76.24	0.00e+00	982.00
IUUC-Dre-028442	Danio rerio	64.59	0.00e+00	658.00
IUUC-Dno-029673	Dasypus novemcinctus	74.46	0.00e+00	1739.00
IUUC-Dor-030518	Dipodomys ordii	63.83	5.00e-130	459.00
IUUC-Ete-033088	Echinops telfairi	58.95	0.00e+00	938.00
IUUC-Eca-033579	Equus caballus	74.59	0.00e+00	1650.00
IUUC-Eeu-034511	Erinaceus europaeus	54.25	0.00e+00	934.00
IUUC-Fca-035792	Felis catus	74.29	0.00e+00	1528.00
IUUC-Fal-037075	Ficedula albicollis	54.88	0.00e+00	755.00
IUUC-Gga-040504	Gallus gallus	53.84	0.00e+00	731.00
IUUC-Gma-044075	Glycine max	47.88	5.00e-85	309.00
IUUC-Ggo-044798	Gorilla gorilla	93.19	0.00e+00	1873.00
IUUC-Hsa-046072	Homo sapiens	96.50	0.00e+00	2083.00
IUUC-Hvu-047620	Hordeum vulgare	41.25	5.00e-74	272.00
IUUC-Itr-048078	Ictidomys tridecemlineatus	77.10	0.00e+00	1814.00
IUUC-Lch-049867	Latimeria chalumnae	67.72	0.00e+00	951.00
IUUC-Lpe-051574	Leersia perrieri	43.97	2.00e-76	280.00
IUUC-Loc-052621	Lepisosteus oculatus	63.97	0.00e+00	700.00
IUUC-Laf-054330	Loxodonta africana	92.90	0.00e+00	1304.00
IUUC-Mcc-054900	Macaca mulatta	99.49	0.00e+00	799.00
IUUC-Mtr-058537	Medicago truncatula	46.58	1.00e-82	301.00
IUUC-Mga-059501	Meleagris gallopavo	40.83	0.00e+00	719.00
IUUC-Mvi-060547	Microbotryum violaceum	45.62	1.00e-80	294.00
IUUC-Mmr-060864	Microcebus murinus	75.49	0.00e+00	1768.00
IUUC-Mdo-062395	Monodelphis domestica	60.45	0.00e+00	1422.00
IUUC-Mmu-064236	Mus musculus	68.55	0.00e+00	1489.00
IUUC-Mac-065039	Musa acuminata	43.88	7.00e-86	312.00
IUUC-Mpu-065822	Mustela putorius furo	77.13	0.00e+00	1719.00
IUUC-Mlu-067091	Myotis lucifugus	73.19	0.00e+00	1584.00
IUUC-Opr-071170	Ochotona princeps	63.46	0.00e+00	1138.00
IUUC-Ont-071832	Oreochromis niloticus	61.58	0.00e+00	650.00
IUUC-Oan-073711	Ornithorhynchus anatinus	57.16	0.00e+00	1248.00
IUUC-Ocu-074596	Oryctolagus cuniculus	96.63	0.00e+00	1053.00
IUUC-Oba-075866	Oryza barthii	44.44	5.00e-81	295.00
IUUC-Obr-076408	Oryza brachyantha	44.30	2.00e-81	297.00
IUUC-Ogl-077559	Oryza glaberrima	44.30	5.00e-82	299.00
IUUC-Ogu-078064	Oryza glumaepatula	44.63	1.00e-81	298.00
IUUC-Oin-079471	Oryza indica	44.30	2.00e-82	300.00
IUUC-Olo-080231	Oryza longistaminata	42.67	3.00e-74	273.00
IUUC-Ome-081746	Oryza meridionalis	44.77	3.00e-81	296.00
IUUC-Oni-082339	Oryza nivara	44.63	1.00e-81	298.00
IUUC-Opu-083194	Oryza punctata	44.63	4.00e-81	297.00
IUUC-Oru-085083	Oryza rufipogon	44.63	8.00e-82	298.00
IUUC-Osa-085395	Oryza sativa	44.30	2.00e-82	301.00
IUUC-Oga-088641	Otolemur garnettii	74.81	0.00e+00	1688.00
IUUC-Oar-089760	Ovis aries	69.18	0.00e+00	1496.00
IUUC-Ptr-091445	Pan troglodytes	96.88	0.00e+00	2132.00
IUUC-Pan-092484	Papio anubis	95.44	0.00e+00	2016.00
IUUC-Psi-093277	Pelodiscus sinensis	53.98	0.00e+00	1088.00
IUUC-Pma-094651	Petromyzon marinus	37.93	2.00e-56	212.00
IUUC-Ppa-095853	Physcomitrella patens	46.82	4.00e-90	326.00
IUUC-Pfo-096469	Poecilia formosa	66.73	0.00e+00	656.00
IUUC-Pab-097794	Pongo abelii	95.87	0.00e+00	1943.00
IUUC-Pop-099693	Populus trichocarpa	44.73	7.00e-81	295.00
IUUC-Ppe-101678	Prunus persica	46.25	2.00e-82	300.00
IUUC-Pva-103238	Pteropus vampyrus	69.36	0.00e+00	1450.00
IUUC-Rno-105068	Rattus norvegicus	68.45	0.00e+00	1491.00
IUUC-Sha-106713	Sarcophilus harrisii	61.76	0.00e+00	1455.00
IUUC-Smo-108727	Selaginella moellendorffii	48.05	1.00e-80	293.00
IUUC-Sit-109895	Setaria italica	44.30	2.00e-83	303.00
IUUC-Sly-111722	Solanum lycopersicum	44.65	3.00e-78	286.00
IUUC-Stu-112912	Solanum tuberosum	44.34	1.00e-77	284.00
IUUC-Sar-113340	Sorex araneus	84.17	0.00e+00	1119.00
IUUC-Sbi-114477	Sorghum bicolor	44.81	3.00e-84	306.00
IUUC-Tgu-117149	Taeniopygia guttata	44.79	0.00e+00	830.00
IUUC-Tru-117776	Takifugu rubripes	65.29	4.00e-175	608.00
IUUC-Tsy-118974	Tarsius syrichta	75.40	0.00e+00	1722.00
IUUC-Tni-120774	Tetraodon nigroviridis	68.00	4.00e-173	600.00
IUUC-Tca-120936	Theobroma cacao	45.93	1.00e-84	308.00
IUUC-Tae-122827	Triticum aestivum	44.95	2.00e-83	303.00
IUUC-Tur-126014	Triticum urartu	44.77	2.00e-79	290.00
IUUC-Tbe-128006	Tupaia belangeri	65.65	2.00e-123	437.00
IUUC-Ttr-128764	Tursiops truncatus	64.86	0.00e+00	1356.00
IUUC-Vvi-131535	Vitis vinifera	46.35	5.00e-87	315.00
IUUC-Xtr-132544	Xenopus tropicalis	57.77	0.00e+00	651.00
IUUC-Xma-133131	Xiphophorus maculatus	63.08	0.00e+00	650.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence