iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121129

Ensembl Protein ID

EOX91595

UniProt Accession

A0A061DNQ6; A0A061DNQ6_THECC

Genbank Protein ID

EOX91593.1; EOX91594.1; EOX91595.1; EOX91596.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM001879; CM001879; CM001879; CM001879

Gene Name

TCM_000733

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_000733	EOX91595	EOX91595

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.90e-30	104.4	236	308

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           + ++f+Cp+slelM+dPv+++sG+ty+r+ I+kw++ g + cP+trq+l++++l+Pn+t+++li +wce+n++
   Q: 236  IAADFCCPLSLELMTDPVIVASGQTYERAFIKKWIDLGLTVCPKTRQTLAHTNLIPNYTVKALIANWCESNNV 308
           6689*****************************************************************9986 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MEISLLKALL SNISSFLNLS SSENINSEPV QKYYQRAEEV LKLLKPILNA IVDSEITSDE 60
VLSKAFEGLG LSVEELREQF ESWQPLLSKV YFVLQVESLI SNIRNSSLDI FQFLKSSHQQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAAATTCAA AGCTGCATTC ATTTAGGTAC TATTTCTTTC TGTCGTTCTT TTTTTTTTTT 60
TTTGGCTTTG AAATCTCTCT TTATTTCTGA GTTCAATTAT CTTTTGATTT TGAGATATGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

tcc:TCM_000733

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000760	Aegilops tauschii	52.32	0.00e+00	724.00
IUUC-Atr-002793	Amborella trichopoda	59.53	0.00e+00	951.00
IUUC-Aly-006261	Arabidopsis lyrata	66.05	0.00e+00	1027.00
IUUC-Ath-006925	Arabidopsis thaliana	65.64	0.00e+00	1028.00
IUUC-Bdi-014197	Brachypodium distachyon	55.50	0.00e+00	784.00
IUUC-Bol-015762	Brassica oleracea	61.00	0.00e+00	916.00
IUUC-Bra-018049	Brassica rapa	61.05	0.00e+00	922.00
IUUC-Gma-043920	Glycine max	69.20	0.00e+00	1097.00
IUUC-Hvu-047089	Hordeum vulgare	55.36	0.00e+00	809.00
IUUC-Lpe-051326	Leersia perrieri	57.07	0.00e+00	780.00
IUUC-Lma-053243	Leptosphaeria maculans	28.80	2.00e-20	93.60
IUUC-Mtr-057910	Medicago truncatula	69.81	0.00e+00	1085.00
IUUC-Mac-064791	Musa acuminata	85.81	5.00e-144	503.00
IUUC-Oba-075484	Oryza barthii	56.50	0.00e+00	750.00
IUUC-Obr-076317	Oryza brachyantha	55.44	0.00e+00	746.00
IUUC-Ogl-077857	Oryza glaberrima	56.50	0.00e+00	752.00
IUUC-Ogu-078826	Oryza glumaepatula	56.76	0.00e+00	749.00
IUUC-Oin-079538	Oryza indica	56.38	0.00e+00	751.00
IUUC-Olo-080425	Oryza longistaminata	55.30	0.00e+00	716.00
IUUC-Ome-081524	Oryza meridionalis	56.78	0.00e+00	749.00
IUUC-Oni-082077	Oryza nivara	56.38	0.00e+00	748.00
IUUC-Opu-083165	Oryza punctata	57.23	0.00e+00	754.00
IUUC-Oru-085180	Oryza rufipogon	56.38	0.00e+00	759.00
IUUC-Osa-085315	Oryza sativa	56.38	0.00e+00	758.00
IUUC-Ppa-095860	Physcomitrella patens	45.56	1.00e-153	536.00
IUUC-Pop-099220	Populus trichocarpa	76.40	0.00e+00	902.00
IUUC-Smo-108857	Selaginella moellendorffii	53.96	4.00e-85	308.00
IUUC-Sit-110349	Setaria italica	55.11	0.00e+00	790.00
IUUC-Sly-111082	Solanum lycopersicum	66.51	0.00e+00	1019.00
IUUC-Stu-112751	Solanum tuberosum	67.07	0.00e+00	1060.00
IUUC-Sbi-114085	Sorghum bicolor	55.53	0.00e+00	759.00
IUUC-Tae-125641	Triticum aestivum	55.07	0.00e+00	787.00
IUUC-Tur-126525	Triticum urartu	49.10	0.00e+00	706.00
IUUC-Vvi-131364	Vitis vinifera	73.33	0.00e+00	1174.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence