iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112732

Ensembl Protein ID

PGSC0003DMT400016998

UniProt Accession

M1A8G0; M1A8G0_SOLTU

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400006640	PGSC0003DMT400016998	PGSC0003DMT400016998

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.30e-31	109.7	67	139

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
            peef+Cp+s++lMrdPv+l+sG+tydr  I+kwl+ g++tcP t+q l+++ l+Pn+ +r++i++wc+ n++
   Q: 67   FPEEFRCPLSKQLMRDPVMLASGQTYDRPFIQKWLKAGNRTCPQTQQVLSHTILTPNHLIRDMISQWCKNNGI 139
           69*******************************************************************9986 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MAKTGVVEGD PLTVKEMELK RELQRLVKAI LSQEEINVDA IDKTQQILLA LKELKLKRRS 60
SSFDLPFPEE FRCPLSKQLM RDPVMLASGQ TYDRPFIQKW LKAGNRTCPQ TQQVLSHTIL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAGAGCGCA GGGGAAGGCA GAAAGAGTGG ATGCTGACGA GTCCATCATA AGACTCTTCC 60
GCGTAGCTGC CAGCTGTCAG GCCACGGATT CCCCTGATAT GGACCCCACT TACATACACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sot:102579911

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000164	Aegilops tauschii	41.35	1.00e-82	299.00
IUUC-Aly-006420	Arabidopsis lyrata	60.74	6.00e-156	542.00
IUUC-Ath-007457	Arabidopsis thaliana	61.17	6.00e-155	539.00
IUUC-Bdi-014069	Brachypodium distachyon	51.96	2.00e-112	398.00
IUUC-Bol-015599	Brassica oleracea	58.30	7.00e-149	519.00
IUUC-Bra-017223	Brassica rapa	60.04	3.00e-148	517.00
IUUC-Gma-043611	Glycine max	66.59	9.00e-175	605.00
IUUC-Hvu-047411	Hordeum vulgare	44.23	5.00e-79	286.00
IUUC-Lpe-050825	Leersia perrieri	52.34	2.00e-113	401.00
IUUC-Mtr-057877	Medicago truncatula	62.83	8.00e-164	568.00
IUUC-Mac-065616	Musa acuminata	50.97	1.00e-118	418.00
IUUC-Oba-075311	Oryza barthii	52.43	7.00e-109	385.00
IUUC-Obr-076232	Oryza brachyantha	52.16	2.00e-109	387.00
IUUC-Ogl-077647	Oryza glaberrima	52.36	1.00e-113	401.00
IUUC-Ogu-078448	Oryza glumaepatula	52.36	9.00e-114	402.00
IUUC-Oin-079693	Oryza indica	52.43	9.00e-109	385.00
IUUC-Olo-080462	Oryza longistaminata	52.22	6.00e-114	402.00
IUUC-Ome-081796	Oryza meridionalis	52.09	8.00e-113	399.00
IUUC-Oni-082158	Oryza nivara	52.36	1.00e-113	402.00
IUUC-Opu-084131	Oryza punctata	52.62	9.00e-115	405.00
IUUC-Oru-084335	Oryza rufipogon	52.36	1.00e-113	402.00
IUUC-Osa-085556	Oryza sativa	52.36	9.00e-114	402.00
IUUC-Pop-099806	Populus trichocarpa	73.03	0.00e+00	669.00
IUUC-Ppe-101662	Prunus persica	71.27	0.00e+00	646.00
IUUC-Sit-110812	Setaria italica	51.83	3.00e-110	390.00
IUUC-Sly-110911	Solanum lycopersicum	97.10	0.00e+00	873.00
IUUC-Sbi-114814	Sorghum bicolor	50.77	5.00e-112	396.00
IUUC-Tca-121080	Theobroma cacao	70.35	0.00e+00	654.00
IUUC-Tae-123657	Triticum aestivum	45.03	4.00e-88	317.00
IUUC-Tur-126060	Triticum urartu	41.36	6.00e-83	300.00
IUUC-Vvi-131168	Vitis vinifera	67.99	0.00e+00	643.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence