iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-100001

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000342

Gene Name

XM_002326391.1; POPTR_0006s11250g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s11250	POPTR_0006s11250.1	POPTR_0006s11250.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.00e-08	36.7	242	280

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiC+e +   p++l+C+H+f++dC+  w        +e +CPlCr
   Q: 242  CAICQEKMHA-PILLRCKHIFCEDCVSEW------FEREGTCPLCR 280
           ********99.999***************......9999******8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MNVLEVSFST TKQKSVYYLF IAQFNNKFKL AYFFMISYGL AGFFVTIWIA VVMFKSNDIL 60
RKQTALKGER KVSMLVGISL AFAIHVVGVY WWYQNDDLLY PLIMLPPKSI PPFWHAIFII 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACGTTC TTGAAGTAAG CTTTTCCACC ACAAAACAAA AATCTGTCTA TTACCTGTTC 60
ATTGCCCAAT TCAATAATAA GTTTAAACTG GCATATTTTT TCATGATTTC TTATGGTAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

pop:POPTR_0006s11250g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000709	Aegilops tauschii	76.89	2.00e-123	434.00
IUUC-Cre-022592	Chlamydomonas reinhardtii	45.45	6.00e-20	91.30
IUUC-Dse-031550	Dothistroma septosporum	41.03	6.00e-10	57.40
IUUC-Dme-031681	Drosophila melanogaster	33.33	6.00e-27	115.00
IUUC-Gma-043596	Glycine max	91.04	3.00e-135	474.00
IUUC-Lch-049901	Latimeria chalumnae	32.83	1.00e-33	137.00
IUUC-Mtr-058255	Medicago truncatula	88.43	3.00e-132	464.00
IUUC-Mac-065421	Musa acuminata	87.50	1.00e-140	492.00
IUUC-Ome-081614	Oryza meridionalis	85.45	7.00e-128	449.00
IUUC-Oni-082296	Oryza nivara	85.45	2.00e-127	448.00
IUUC-Opu-083546	Oryza punctata	85.45	1.00e-127	449.00
IUUC-Oru-084510	Oryza rufipogon	85.45	2.00e-127	448.00
IUUC-Ppa-095990	Physcomitrella patens	73.13	9.00e-110	389.00
IUUC-Pca-100148	Procavia capensis	30.57	3.00e-33	135.00
IUUC-Tni-120152	Tetraodon nigroviridis	32.45	3.00e-34	138.00
IUUC-Tca-121155	Theobroma cacao	89.55	5.00e-147	513.00
IUUC-Tur-126177	Triticum urartu	75.09	3.00e-128	450.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence