iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017962

Ensembl Protein ID

Bra040776.1-P

UniProt Accession

M4FI47; M4FI47_BRARP

Protein Name

PHD finger protein ING

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra040776	Bra040776.1	Bra040776.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	5.40e-09	37.1	208	257

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCek..Cr..ewfHpaClklsveeelpnsekwiCpkCr 52
           ++C vC++ + ++  ++ C++  C+  ewfH++C++l+  e++ +  kw+Cp Cr
   Q: 208  TYC-VCHQVSFGD--MIACDNenCQggEWFHYTCVGLT-PETRFKG-KWYCPTCR 257
           69*.********9..*****999*999***********.4444444.4******8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MAIARTGVYV DDYLEYASTF PAELQRLLNT VRELDERSQS LINQTRQQTK YCLGLASQSS 60
KKGSGNNNHY NTGLDDDETV EKMRKEIESS QENALSLCTE KVLLARQAYD LIDSHLKRLD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAATAG CGCGAACTGG AGTTTACGTT GATGATTACC TCGAGTGTAA GATCCCAAAT 60
TTCTTCTCTC CAATCCTCTA TTTTTCTGAT TCGTTTCGAT TTAGGGCTTC AATTTTCTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR028652--ING2_plant-typ
IPR028651--ING_fam
IPR024610--ING_N_histone_binding
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50016--ZF_PHD_2

Pfam

PF12998--ING

SMART

SM01408--ING
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding
GO:0016569--P:covalent chromatin modification

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002435	Amborella trichopoda	72.69	1.00e-100	358.00
IUUC-Ath-006578	Arabidopsis thaliana	93.54	1.00e-126	444.00
IUUC-Bdi-014508	Brachypodium distachyon	65.77	5.00e-96	343.00
IUUC-Bol-015751	Brassica oleracea	97.72	2.00e-145	507.00
IUUC-Gmo-038982	Gadus morhua	35.25	1.00e-36	145.00
IUUC-Gac-042184	Gasterosteus aculeatus	34.88	1.00e-35	142.00
IUUC-Gma-044224	Glycine max	79.40	8.00e-115	405.00
IUUC-Hvu-047275	Hordeum vulgare	63.02	6.00e-92	329.00
IUUC-Lpe-051512	Leersia perrieri	63.74	5.00e-95	340.00
IUUC-Mtr-058288	Medicago truncatula	79.09	6.00e-117	412.00
IUUC-Mac-065671	Musa acuminata	70.66	2.00e-104	371.00
IUUC-Obr-076822	Oryza brachyantha	65.27	2.00e-98	351.00
IUUC-Ogl-077432	Oryza glaberrima	64.12	5.00e-97	346.00
IUUC-Osa-085802	Oryza sativa	64.12	5.00e-97	346.00
IUUC-Ola-086429	Oryzias latipes	34.62	5.00e-31	127.00
IUUC-Ppa-096009	Physcomitrella patens	61.11	4.00e-83	300.00
IUUC-Pfo-096617	Poecilia formosa	35.14	2.00e-36	145.00
IUUC-Pop-099544	Populus trichocarpa	79.48	2.00e-109	388.00
IUUC-Ppe-101698	Prunus persica	80.15	1.00e-100	358.00
IUUC-Smo-108678	Selaginella moellendorffii	60.92	2.00e-82	298.00
IUUC-Sit-110189	Setaria italica	66.28	6.00e-91	326.00
IUUC-Sly-111209	Solanum lycopersicum	78.49	1.00e-104	372.00
IUUC-Stu-112762	Solanum tuberosum	78.49	1.00e-104	372.00
IUUC-Sbi-114379	Sorghum bicolor	65.13	1.00e-98	352.00
IUUC-Tca-121271	Theobroma cacao	81.89	5.00e-114	403.00
IUUC-Tae-122798	Triticum aestivum	63.02	2.00e-92	331.00
IUUC-Vvi-131583	Vitis vinifera	80.00	2.00e-118	418.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence