iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-080459

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
KN538932.1_FG005	KN538932.1_FGT005	KN538932.1_FGP005

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-06	29.5	113	162

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf.........kdg.plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iCl ++         +++   + +C H+fha C+  w         + +CPlCr
   Q: 113  CTICLAELeaggggggcQRQvAELSSCSHAFHAACIDGW------VVEAGTCPLCR 162
           99**9999666655555222344788*************......99999*****8 PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

MARSCSSSSS SSYDLALTLR LKLLLLLDIL AVLRFLAAAL LERLGVVSCQ EDNELPGFHS 60
WCDSDVVDTG AMERLMQAKL STSWYRLRRR ASRGGPDNMA SPSPHGDTSP AICTICLAEL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGCGTT CCTGCAGCAG CAGCAGCAGC AGTAGCTACG ACCTCGCGTT AACGTTGCGG 60
CTGAAGCTCC TGCTCCTCCT CGACATCCTC GCCGTCCTCC GCTTCCTCGC GGCGGCCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-015004	Brachypodium distachyon	47.73	7.00e-15	72.40
IUUC-Lpe-050689	Leersia perrieri	55.20	8.00e-24	102.00
IUUC-Mac-065378	Musa acuminata	50.75	3.00e-11	60.50
IUUC-Oba-075274	Oryza barthii	95.35	2.00e-63	233.00
IUUC-Obr-076016	Oryza brachyantha	66.41	8.00e-24	101.00
IUUC-Ogl-077413	Oryza glaberrima	95.35	2.00e-63	233.00
IUUC-Ome-081112	Oryza meridionalis	94.57	3.00e-61	226.00
IUUC-Oni-082171	Oryza nivara	94.57	4.00e-63	232.00
IUUC-Oru-084623	Oryza rufipogon	95.35	2.00e-63	233.00
IUUC-Osa-085575	Oryza sativa	95.35	2.00e-63	233.00
IUUC-Sit-109890	Setaria italica	41.67	8.00e-11	59.30
IUUC-Sbi-114852	Sorghum bicolor	56.41	1.00e-07	48.50
IUUC-Tae-122852	Triticum aestivum	43.15	1.00e-20	92.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence