iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098862

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000355

Gene Name

POPTRDRAFT_671073; POPTR_0019s09450g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0019s09450	POPTR_0019s09450.1	POPTR_0019s09450.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.50e-15	56.3	675	709

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsdtllvsGsdDgtikvWDlrtgvl 35
           gH++ v+ la  d++l sGs+Dgti++W+l+++ +
   Q: 675  GHKSVVSTLAACDGILYSGSWDGTIRLWSLTDHSP 709
           899*999998657*****************99876 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MESPELPECP VCLSTYDGEY TIPRVLACGH TTCESCLKNI PQKYPLTIRC PACTQLVKYP 60
SQQGPSSLPK NIDLLRLVQQ LQDHNPQKPN NKSQIDKPVL AQDFDFFVPP SWSDEFYTSW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAATGGAATC ACCGGAATTA CCAGAATGTC CGGTGTGTCT ATCAACCTAC GACGGCGAGT 60
ACACTATCCC AAGAGTACTC GCATGTGGGC ATACAACCTG CGAGTCATGC CTTAAAAATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0853--WD repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011009--Kinase-like_dom
IPR000719--Prot_kinase_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50011--PROTEIN_KINASE_DOM
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS50089--ZF_RING_2

Pfam

PF00400--WD40
PF13445--zf-RING_UBOX

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00184--RING
SM00220--S_TKc
SM00320--WD40

Gene Ontology

GO:0005524--F:ATP binding
GO:0004672--F:protein kinase activity
GO:0008270--F:zinc ion binding

KEGG

pop:POPTR_0019s09450g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000569	Aegilops tauschii	31.95	9.00e-79	287.00
IUUC-Atr-003105	Amborella trichopoda	38.82	2.00e-147	516.00
IUUC-Aly-006480	Arabidopsis lyrata	42.35	2.00e-160	560.00
IUUC-Ath-007227	Arabidopsis thaliana	46.79	0.00e+00	707.00
IUUC-Bdi-015002	Brachypodium distachyon	39.75	1.00e-113	403.00
IUUC-Bol-015912	Brassica oleracea	47.21	0.00e+00	695.00
IUUC-Bra-017564	Brassica rapa	47.75	0.00e+00	726.00
IUUC-Gma-043879	Glycine max	49.23	0.00e+00	784.00
IUUC-Hvu-047671	Hordeum vulgare	39.47	4.00e-121	427.00
IUUC-Lpe-051223	Leersia perrieri	35.91	2.00e-108	385.00
IUUC-Mtr-058342	Medicago truncatula	69.20	1.00e-116	412.00
IUUC-Mac-065113	Musa acuminata	39.21	4.00e-151	528.00
IUUC-Oba-075807	Oryza barthii	37.42	6.00e-120	424.00
IUUC-Obr-076101	Oryza brachyantha	37.65	6.00e-116	411.00
IUUC-Ogl-077321	Oryza glaberrima	36.27	6.00e-117	414.00
IUUC-Ogu-078456	Oryza glumaepatula	38.36	1.00e-114	406.00
IUUC-Oin-079822	Oryza indica	37.48	3.00e-119	422.00
IUUC-Olo-080336	Oryza longistaminata	39.69	5.00e-111	394.00
IUUC-Ome-081976	Oryza meridionalis	37.06	3.00e-113	402.00
IUUC-Oni-082359	Oryza nivara	37.44	1.00e-118	419.00
IUUC-Opu-083757	Oryza punctata	36.86	3.00e-114	405.00
IUUC-Oru-085207	Oryza rufipogon	37.54	5.00e-119	421.00
IUUC-Osa-085546	Oryza sativa	32.85	1.00e-67	250.00
IUUC-Ppa-095665	Physcomitrella patens	33.49	2.00e-60	227.00
IUUC-Ppe-101295	Prunus persica	53.19	0.00e+00	808.00
IUUC-Smo-109481	Selaginella moellendorffii	27.41	3.00e-54	207.00
IUUC-Sit-110599	Setaria italica	36.69	1.00e-119	423.00
IUUC-Sly-111867	Solanum lycopersicum	56.46	1.00e-114	405.00
IUUC-Stu-112296	Solanum tuberosum	44.82	0.00e+00	694.00
IUUC-Sbi-114828	Sorghum bicolor	36.55	1.00e-123	436.00
IUUC-Tca-121601	Theobroma cacao	55.08	0.00e+00	860.00
IUUC-Tae-125330	Triticum aestivum	38.24	4.00e-127	448.00
IUUC-Tur-126303	Triticum urartu	41.36	2.00e-120	425.00
IUUC-Vvi-130947	Vitis vinifera	52.41	0.00e+00	869.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence