iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058785

Ensembl Protein ID

KEH38087

UniProt Accession

A0A072V8C4; A0A072V8C4_MEDTR

Genbank Protein ID

KEH38087.1

Protein Name

Zinc finger, C3HC4 type (RING finger) protein

Genbank Nucleotide ID

CM001218

Gene Name

MTR_2g461020

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_2g461020	KEH38087	KEH38087

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.70e-06	29.2	142	183

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cle+f   ++ ++ lpC H fh +Cl+ w        ++ +CP Cr
   Q: 142  CAVCLESFkigDK-LIPLPCAHKFHSTCLKPW------LENNSHCPCCR 183
           ********66433.77799*************......**********8 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MAGMLPGVES ARRRRVHKCG GFSDSPSFSS HNTSRRSSFC LYASNHESRI SSSSSMQRNI 60
LYQSHQDENM VGAARAAKQR LDDKFRSQRV SENIRKKNMK CVEGRKESIE ELQSEVYGTK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACCCACCTA AACAAGCTCT TCATTTCTTA ATTTTTATCT TAAAAGTTAG AGCAACCCAC 60
TAGCATCACC AAAAGCAGTT CTAATCATTC ACCTGTCAAT CACCAAAGCA TTATTATCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_2g461020

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000673	Aegilops tauschii	51.32	4.00e-12	63.20
IUUC-Atr-002911	Amborella trichopoda	46.99	4.00e-21	91.70
IUUC-Aly-006139	Arabidopsis lyrata	47.00	3.00e-41	160.00
IUUC-Ath-007567	Arabidopsis thaliana	46.77	2.00e-40	157.00
IUUC-Bdi-014038	Brachypodium distachyon	36.02	3.00e-23	100.00
IUUC-Bol-015257	Brassica oleracea	45.18	2.00e-38	151.00
IUUC-Bra-017025	Brassica rapa	45.69	6.00e-39	152.00
IUUC-Hvu-047812	Hordeum vulgare	35.82	2.00e-16	78.20
IUUC-Lpe-051053	Leersia perrieri	34.56	3.00e-16	77.80
IUUC-Mac-064686	Musa acuminata	48.68	1.00e-37	148.00
IUUC-Oba-075651	Oryza barthii	36.11	4.00e-16	77.40
IUUC-Ogl-077891	Oryza glaberrima	36.11	2.00e-16	78.20
IUUC-Ogu-078446	Oryza glumaepatula	35.65	2.00e-15	75.10
IUUC-Oin-079883	Oryza indica	35.65	2.00e-15	75.50
IUUC-Ome-081697	Oryza meridionalis	33.03	1.00e-16	79.00
IUUC-Oni-082580	Oryza nivara	31.75	4.00e-14	70.10
IUUC-Opu-083785	Oryza punctata	35.44	3.00e-17	81.30
IUUC-Oru-084516	Oryza rufipogon	35.65	1.00e-15	75.90
IUUC-Osa-085652	Oryza sativa	35.12	7.00e-18	83.20
IUUC-Ppa-095736	Physcomitrella patens	43.82	2.00e-17	82.80
IUUC-Smo-109484	Selaginella moellendorffii	45.68	4.00e-14	68.20
IUUC-Sit-110449	Setaria italica	32.79	4.00e-21	94.40
IUUC-Sbi-113825	Sorghum bicolor	36.49	1.00e-28	118.00
IUUC-Tca-120960	Theobroma cacao	61.78	1.00e-63	234.00
IUUC-Tae-125500	Triticum aestivum	37.44	2.00e-19	88.60
IUUC-Tur-126628	Triticum urartu	34.62	6.00e-15	72.40
IUUC-Vvi-131648	Vitis vinifera	59.69	3.00e-64	237.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence