iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-120960

Ensembl Protein ID

EOY31305

UniProt Accession

A0A061GN77; A0A061GN77_THECC

Genbank Protein ID

EOY31305.1

Protein Name

RING/U-box superfamily protein

Genbank Nucleotide ID

CM001887

Gene Name

TCM_038262

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_038262	EOY31305	EOY31305

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.40e-06	28.1	145	186

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCle+fk g  ++ lpC H fh  Cl  w        ++++CP Cr
   Q: 145  CAICLERFKAGetLVHLPCAHRFHSRCLIPW------VENNAHCPCCR 186
           ********66665555***************......**********8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MAGMLPGVEC ARRRRFHQSG GASDSPSTVP IGWTRRSSFC LYTSNHETHH SSVSSQQRSI 60
LNQANQDEKL GEVAREAKER LDERLRSQRK SEPKRQNSKE SLRCVDGRSM VQGEFHKEVF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTTTCCAA CAGTCTTTTC GGTCTTAATA TTTTAATCTG TTGGGTATAT TTTGAGCTCT 60
TACACAGAAA CATGACTCAT ACTTCTTCTA TCTCTCAAAT GAAGGGTGAT TGAGAAAGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000673	Aegilops tauschii	42.68	2.00e-13	67.00
IUUC-Atr-002911	Amborella trichopoda	49.40	1.00e-22	96.30
IUUC-Aly-006139	Arabidopsis lyrata	50.00	2.00e-49	187.00
IUUC-Ath-007567	Arabidopsis thaliana	48.74	6.00e-48	182.00
IUUC-Bdi-014038	Brachypodium distachyon	39.34	5.00e-28	116.00
IUUC-Bol-015257	Brassica oleracea	45.23	1.00e-42	164.00
IUUC-Bra-017025	Brassica rapa	46.73	8.00e-44	168.00
IUUC-Hvu-047812	Hordeum vulgare	40.30	9.00e-26	108.00
IUUC-Lpe-051053	Leersia perrieri	38.14	9.00e-22	95.90
IUUC-Mtr-058785	Medicago truncatula	61.78	2.00e-55	207.00
IUUC-Mac-064686	Musa acuminata	49.74	1.00e-41	161.00
IUUC-Ocu-074846	Oryctolagus cuniculus	31.90	1.00e-09	58.50
IUUC-Oba-075651	Oryza barthii	40.67	1.00e-22	98.60
IUUC-Obr-076263	Oryza brachyantha	54.29	1.00e-08	52.80
IUUC-Ogl-077891	Oryza glaberrima	40.67	8.00e-23	99.40
IUUC-Ogu-078446	Oryza glumaepatula	42.11	2.00e-22	98.60
IUUC-Oin-079883	Oryza indica	40.67	2.00e-22	97.80
IUUC-Ome-081697	Oryza meridionalis	39.25	7.00e-24	102.00
IUUC-Oni-082580	Oryza nivara	35.94	2.00e-17	81.30
IUUC-Opu-083785	Oryza punctata	39.32	3.00e-23	100.00
IUUC-Oru-084516	Oryza rufipogon	40.67	2.00e-22	99.00
IUUC-Osa-085652	Oryza sativa	43.20	1.00e-24	105.00
IUUC-Ppa-095409	Physcomitrella patens	59.18	6.00e-15	74.30
IUUC-Sit-110008	Setaria italica	54.35	5.00e-13	67.00
IUUC-Sar-113346	Sorex araneus	32.76	5.00e-10	60.10
IUUC-Sbi-113825	Sorghum bicolor	39.34	3.00e-35	140.00
IUUC-Tae-122845	Triticum aestivum	39.81	2.00e-24	104.00
IUUC-Tur-126628	Triticum urartu	42.45	3.00e-22	96.70
IUUC-Vvi-131648	Vitis vinifera	80.63	2.00e-88	317.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence