iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.6__2484__AT5G24870.1	fgenesh2_kg.6__2484__AT5G24870.1	fgenesh2_kg.6__2484__AT5G24870.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.40e-07	31.0	463	504

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+e++   d++ +lpC+H +h +C q+w     + +k++ CP+C+
   Q: 463  CSICQEEYvdGDEVGTLPCQHKYHVSCAQQW-----LRMKNW-CPICK 504
           ********8855599****************.....788888.****6 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MDGLKGKRTF RPIMQRKASG LVLHENMKKK DDKSLVPICS RIGCSSRISS TKGALIDHKA 60
KSTVSSFRSF SNGKESVGSS SRSMSGFGGT KKASKVGCRR QLSSLLDMDS SESSSVNEES 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCTCATGTC CTTCCGTACT AAATATCTAA ACCGTTAATC TCAGGCTTCA CGCAACGAAA 60
CCCAAAATCA ACGGATCAGA TCACTCCGAC TTCTGTTTCG CCTTTGCTAC GCCACTTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_489350

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006757	Arabidopsis thaliana	88.46	0.00e+00	708.00
IUUC-Bol-016611	Brassica oleracea	65.90	1.00e-117	416.00
IUUC-Gma-042907	Glycine max	43.83	1.00e-91	330.00
IUUC-Hvu-047200	Hordeum vulgare	64.33	4.00e-60	225.00
IUUC-Lpe-051551	Leersia perrieri	65.24	1.00e-64	240.00
IUUC-Mac-064708	Musa acuminata	45.87	6.00e-64	238.00
IUUC-Oba-074994	Oryza barthii	60.91	7.00e-65	241.00
IUUC-Obr-076337	Oryza brachyantha	64.15	1.00e-52	200.00
IUUC-Ogl-077817	Oryza glaberrima	60.91	7.00e-65	241.00
IUUC-Ogu-077954	Oryza glumaepatula	61.42	1.00e-65	243.00
IUUC-Olo-080304	Oryza longistaminata	61.42	1.00e-65	243.00
IUUC-Oni-082765	Oryza nivara	61.42	1.00e-65	243.00
IUUC-Opu-083134	Oryza punctata	45.03	6.00e-67	247.00
IUUC-Oru-084289	Oryza rufipogon	61.42	2.00e-65	243.00
IUUC-Osa-085712	Oryza sativa	61.42	2.00e-65	243.00
IUUC-Ola-087143	Oryzias latipes	35.92	5.00e-14	71.20
IUUC-Ppa-095313	Physcomitrella patens	56.21	8.00e-49	188.00
IUUC-Pop-099152	Populus trichocarpa	66.86	9.00e-70	256.00
IUUC-Smo-108847	Selaginella moellendorffii	52.56	1.00e-44	173.00
IUUC-Stu-112025	Solanum tuberosum	37.15	4.00e-56	211.00
IUUC-Tru-118756	Takifugu rubripes	36.89	1.00e-15	76.60
IUUC-Tni-120423	Tetraodon nigroviridis	36.89	2.00e-15	76.30
IUUC-Tca-121441	Theobroma cacao	54.70	3.00e-91	328.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence