iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000014966.2	ENSLACT00000017117.2	ENSLACP00000016997.2
ENSLACG00000014966.2	ENSLACT00000017118.1	ENSLACP00000016998.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.10e-17	63.8	139	178
ULD/UDP/UBQ/UBQ_PIM	2.50e-25	88.5	1	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 2    ededkleqlveMGFdreealqaLraannnleaAveyLldg 41
           e+e ++ ++++ G++re+++ aLra++nn+ +AveyLl+g
   Q: 139  EYENMVTEIMAIGYERERVVAALRASFNNPHRAVEYLLTG 178
           67899*********************************97 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           m++t+ktl++++f++e+++++tv+ lKeki++ +g   +p++ qkLIyaGk+L+Dd +++e++i+++++++++v+k+k
   Q: 1    MQITLKTLQQQTFRIEIEPEQTVKVLKEKIEEAKGkeaFPVSGQKLIYAGKVLNDDVPIREYKIDEKNFIVVMVTKPK 78
           99*************************************************************************997 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MQITLKTLQQ QTFRIEIEPE QTVKVLKEKI EEAKGKEAFP VSGQKLIYAG KVLNDDVPIR 60
EYKIDEKNFI VVMVTKPKNA PMTRSVPTEQ TSASEFSYSV NIQNAWNPKP TWETDNSSSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAACTGACCT GTGATATCTC AAAAGCTAAT ACATTTAGCC TAATAAAAAA AAGTTAAAAT 60
TCTGGTGGTT GCATTTATTT TCCTTTGGCT TAATAGCCCT CTGCAATAAT TCCTTTGATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001515	Ailuropoda melanoleuca	61.38	2.00e-101	362.00
IUUC-Atr-002756	Amborella trichopoda	36.32	5.00e-55	207.00
IUUC-Aca-004704	Anolis carolinensis	59.03	2.00e-86	312.00
IUUC-Bta-012377	Bos taurus	61.06	2.00e-107	382.00
IUUC-Bdi-014253	Brachypodium distachyon	32.60	2.00e-44	172.00
IUUC-Bol-015272	Brassica oleracea	35.11	4.00e-52	198.00
IUUC-Bra-016970	Brassica rapa	36.34	1.00e-54	206.00
IUUC-Cel-018364	Caenorhabditis elegans	28.61	2.00e-25	108.00
IUUC-Cja-018946	Callithrix jacchus	58.54	3.00e-94	338.00
IUUC-Cfa-020577	Canis familiaris	61.81	9.00e-111	393.00
IUUC-Cpo-021850	Cavia porcellus	61.81	9.00e-118	416.00
IUUC-Csa-023183	Chlorocebus sabaeus	60.80	1.00e-107	382.00
IUUC-Cne-027056	Cryptococcus neoformans	47.44	3.00e-15	76.30
IUUC-Dre-028209	Danio rerio	48.36	7.00e-79	287.00
IUUC-Dno-030017	Dasypus novemcinctus	55.64	3.00e-86	311.00
IUUC-Dor-030358	Dipodomys ordii	68.00	5.00e-75	274.00
IUUC-Eca-033599	Equus caballus	55.87	1.00e-92	332.00
IUUC-Fca-036051	Felis catus	61.56	6.00e-110	390.00
IUUC-Gmo-038528	Gadus morhua	53.74	4.00e-90	324.00
IUUC-Gga-040133	Gallus gallus	66.54	6.00e-60	224.00
IUUC-Gac-042298	Gasterosteus aculeatus	49.75	7.00e-84	303.00
IUUC-Gma-044245	Glycine max	33.66	1.00e-53	203.00
IUUC-Ggo-045084	Gorilla gorilla	60.80	5.00e-107	380.00
IUUC-Hsa-046614	Homo sapiens	60.40	3.00e-105	375.00
IUUC-Itr-047875	Ictidomys tridecemlineatus	61.65	3.00e-111	394.00
IUUC-Kpa-049314	Komagataella pastoris	31.03	1.00e-37	149.00
IUUC-Lma-053328	Leptosphaeria maculans	51.32	6.00e-13	65.10
IUUC-Mcc-055860	Macaca mulatta	60.80	1.00e-107	382.00
IUUC-Meu-056459	Macropus eugenii	70.47	2.00e-86	312.00
IUUC-Mmr-060819	Microcebus murinus	61.90	5.00e-112	397.00
IUUC-Mdo-062742	Monodelphis domestica	59.50	4.00e-116	410.00
IUUC-Mmu-063929	Mus musculus	62.41	7.00e-110	390.00
IUUC-Mac-064724	Musa acuminata	34.98	1.00e-55	209.00
IUUC-Mpu-066684	Mustela putorius furo	62.06	8.00e-112	396.00
IUUC-Mlu-067787	Myotis lucifugus	58.97	9.00e-101	359.00
IUUC-Nle-069846	Nomascus leucogenys	52.99	2.00e-91	329.00
IUUC-Ont-072271	Oreochromis niloticus	54.85	7.00e-66	244.00
IUUC-Oan-073572	Ornithorhynchus anatinus	58.66	4.00e-108	384.00
IUUC-Ogl-077067	Oryza glaberrima	32.75	8.00e-50	190.00
IUUC-Opu-083756	Oryza punctata	41.09	2.00e-38	152.00
IUUC-Ola-086474	Oryzias latipes	54.09	3.00e-39	155.00
IUUC-Oga-089075	Otolemur garnettii	57.89	6.00e-96	343.00
IUUC-Oar-090387	Ovis aries	59.80	3.00e-104	371.00
IUUC-Ptr-090912	Pan troglodytes	58.40	5.00e-97	347.00
IUUC-Pan-092140	Papio anubis	60.80	2.00e-107	382.00
IUUC-Psi-093347	Pelodiscus sinensis	60.16	6.00e-47	181.00
IUUC-Pno-095064	Phaeosphaeria nodorum	40.00	8.00e-18	84.30
IUUC-Pfo-096607	Poecilia formosa	54.92	1.00e-89	322.00
IUUC-Pab-097738	Pongo abelii	57.04	3.00e-95	341.00
IUUC-Pca-100348	Procavia capensis	68.00	6.00e-74	270.00
IUUC-Pva-102412	Pteropus vampyrus	61.56	2.00e-109	388.00
IUUC-Ptt-103717	Puccinia triticina	51.47	4.00e-30	125.00
IUUC-Rno-105569	Rattus norvegicus	60.15	9.00e-105	373.00
IUUC-Sce-106214	Saccharomyces cerevisiae	38.69	1.00e-17	83.60
IUUC-Sha-106918	Sarcophilus harrisii	60.31	1.00e-98	352.00
IUUC-Sja-107851	Schizosaccharomyces japonicus	36.60	6.00e-52	197.00
IUUC-Sly-111899	Solanum lycopersicum	35.45	5.00e-54	204.00
IUUC-Stu-112027	Solanum tuberosum	35.92	6.00e-56	211.00
IUUC-Ssc-115460	Sus scrofa	61.31	5.00e-108	384.00
IUUC-Tgu-116918	Taeniopygia guttata	50.59	8.00e-88	317.00
IUUC-Tsy-119385	Tarsius syrichta	78.95	5.00e-32	130.00
IUUC-Tvi-122617	Trichoderma virens	37.14	1.00e-43	170.00
IUUC-Tbe-127603	Tupaia belangeri	78.68	3.00e-53	202.00
IUUC-Ttr-129232	Tursiops truncatus	68.90	2.00e-77	282.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence