iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-130902

UUCD1 version

UUC-ViV-00555

Ensembl Protein ID

VIT_12s0028g02530.t01

UniProt Accession

F6H4X9; F6H4X9_VITVI

Genbank Protein ID

CCB47347.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595235

Gene Name

VIT_12s0028g02530

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_12s0028g02530	VIT_12s0028g02530.t01	VIT_12s0028g02530.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.40e-08	35.7	120	162

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl+ +++g   ++lp C+H+fha+C+ kw        ++ +CP+Cr
   Q: 120  CAVCLSVLEEGeiARLLPnCKHTFHAECIDKW------LGTHSTCPICR 162
           ********88777888999*************......**********8 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MSFPFPPMPY STPLSSDDDD DNGSYTTSHK SSSDLNSKIM LTAIVSLSVV IALVITLHIY 60
ARCVLRRRAR RRSALLSITL SRVHSDEPPK TGLDQSVIDS LPMFKFSEND TQEEGGTTDC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAACTCAAA GGCATAGAGA AGCCATGAGT TTCCCTTTTC CTCCTATGCC ATACAGTACG 60
CCGTTGAGCA GTGATGATGA TGATGATAAT GGTAGCTACA CTACTTCTCA CAAAAGCTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

vvi:100248798

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003161	Amborella trichopoda	44.58	5.00e-28	116.00
IUUC-Aly-005547	Arabidopsis lyrata	45.78	3.00e-34	137.00
IUUC-Bol-015414	Brassica oleracea	47.25	1.00e-34	139.00
IUUC-Bra-017724	Brassica rapa	53.54	4.00e-27	113.00
IUUC-Cja-018848	Callithrix jacchus	45.95	1.00e-15	77.40
IUUC-Dor-030261	Dipodomys ordii	45.95	7.00e-16	77.80
IUUC-Ete-032541	Echinops telfairi	46.75	3.00e-14	72.40
IUUC-Gma-044362	Glycine max	48.86	2.00e-29	120.00
IUUC-Mtr-057688	Medicago truncatula	51.96	2.00e-27	113.00
IUUC-Mac-065470	Musa acuminata	41.97	2.00e-27	115.00
IUUC-Oan-073236	Ornithorhynchus anatinus	45.95	1.00e-15	77.00
IUUC-Pop-098962	Populus trichocarpa	49.19	4.00e-37	146.00
IUUC-Ppe-101543	Prunus persica	55.04	3.00e-50	190.00
IUUC-Sly-111845	Solanum lycopersicum	51.82	3.00e-48	183.00
IUUC-Stu-112253	Solanum tuberosum	56.22	3.00e-57	214.00
IUUC-Tsy-119421	Tarsius syrichta	44.16	1.00e-13	70.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence