iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lpe-051445

Ensembl Protein ID

LPERR05G16040.1

UniProt Accession

A0A0D9WHP4; A0A0D9WHP4_9ORYZ

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
LPERR05G16040	LPERR05G16040.1	LPERR05G16040.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.90e-32	112.0	297	369

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+CpIsl+lMrdPvv++sG+tydr+sI +w+ sg++tcP+t+q lt+ ++vPn++l++li++wc en++
   Q: 297  PPPDFRCPISLDLMRDPVVSASGQTYDRESITRWFGSGKSTCPKTGQVLTNLEIVPNKALKNLISRWCRENGV 369
           79********************************************************************986 PP

Organism

Leersia perrieri

Protein Sequence
(Fasta)

MANARNAAAS KQFPEIHFVH SSDHSKSAMA KARNAAAASS SPSSSPYSSS ASDGEILRSL 60
HRLARDLSAA EAPAPFLETV FAAISRRAKL LAAVFDDLLR CGRLPRSASL CLREVLLVLQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCAACG CGAGGAACGC GGCCGCATCC AAACAATTTC CAGAAATCCA CTTCGTTCAT 60
TCATCCGATC ACAGCAAGTC AGCAATGGCC AAAGCGAGGA ACGCGGCTGC CGCGTCGTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002566	Amborella trichopoda	42.26	4.00e-103	368.00
IUUC-Aly-005828	Arabidopsis lyrata	44.14	8.00e-130	456.00
IUUC-Ath-007101	Arabidopsis thaliana	44.65	1.00e-129	456.00
IUUC-Bdi-014870	Brachypodium distachyon	81.76	0.00e+00	867.00
IUUC-Bol-015511	Brassica oleracea	43.47	4.00e-129	454.00
IUUC-Bra-017197	Brassica rapa	43.62	7.00e-129	453.00
IUUC-Gma-043531	Glycine max	42.84	1.00e-104	373.00
IUUC-Hvu-047557	Hordeum vulgare	84.85	0.00e+00	805.00
IUUC-Mtr-058241	Medicago truncatula	43.87	5.00e-115	407.00
IUUC-Mac-065033	Musa acuminata	54.11	4.00e-144	504.00
IUUC-Oba-075591	Oryza barthii	92.13	0.00e+00	899.00
IUUC-Obr-076550	Oryza brachyantha	81.42	0.00e+00	813.00
IUUC-Ogl-077709	Oryza glaberrima	92.13	0.00e+00	899.00
IUUC-Ogu-078626	Oryza glumaepatula	92.13	0.00e+00	899.00
IUUC-Oin-080113	Oryza indica	91.98	0.00e+00	899.00
IUUC-Olo-080301	Oryza longistaminata	86.24	4.00e-171	593.00
IUUC-Ome-081924	Oryza meridionalis	92.40	0.00e+00	908.00
IUUC-Oni-082284	Oryza nivara	91.98	0.00e+00	896.00
IUUC-Opu-083971	Oryza punctata	91.97	0.00e+00	877.00
IUUC-Oru-084898	Oryza rufipogon	91.98	0.00e+00	946.00
IUUC-Osa-085340	Oryza sativa	88.93	0.00e+00	717.00
IUUC-Pop-099292	Populus trichocarpa	46.14	7.00e-146	510.00
IUUC-Ppe-101643	Prunus persica	46.77	2.00e-147	515.00
IUUC-Sit-110788	Setaria italica	78.29	0.00e+00	660.00
IUUC-Sly-111346	Solanum lycopersicum	45.76	1.00e-134	473.00
IUUC-Stu-112435	Solanum tuberosum	45.21	2.00e-132	466.00
IUUC-Sbi-114339	Sorghum bicolor	78.10	0.00e+00	721.00
IUUC-Tca-121203	Theobroma cacao	48.42	2.00e-149	521.00
IUUC-Tae-124205	Triticum aestivum	81.96	0.00e+00	708.00
IUUC-Tur-126373	Triticum urartu	67.31	1.00e-65	242.00
IUUC-Vvi-131545	Vitis vinifera	43.91	2.00e-124	438.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence