iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017350

Ensembl Protein ID

Bra027977.1-P

UniProt Accession

M4EGR3; M4EGR3_BRARP

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra027977	Bra027977.1	Bra027977.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.30e-32	111.0	279	350

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +p+eflCpI+le+M+dPv++++G+ty+++ I+kw++ g+ktcP+t+q+l++ +l Pn++l+++i +wce+n+
   Q: 279  LPHEFLCPITLEIMQDPVIIATGQTYEKEGIQKWFDAGHKTCPKTGQTLDHLSLAPNYALKNIILQWCEKNN 350
           599******************************************************************997 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MDLDEEATRE RESIEEVVNA EESIDDEAID IHEEEVSDVK DDLVSEIITT IEFLDQISDY 60
RRTQQKECFN LVRRLKILIR FMDEIRGFEF PSPASCMHFL NRLRKVILAA RKLLETCNNG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATTTAG ATGAAGAAGC CACAAGAGAA CGAGAGAGCA TTGAAGAGGT CGTCAATGCA 60
GAAGAATCTA TAGATGATGA AGCCATAGAT ATTCATGAGG AAGAAGTCAG CGACGTGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000398	Aegilops tauschii	53.14	1.00e-171	595.00
IUUC-Atr-002787	Amborella trichopoda	60.84	0.00e+00	723.00
IUUC-Aly-006301	Arabidopsis lyrata	85.65	0.00e+00	1089.00
IUUC-Ath-007379	Arabidopsis thaliana	84.29	0.00e+00	1071.00
IUUC-Bdi-014851	Brachypodium distachyon	53.33	2.00e-170	592.00
IUUC-Bol-016076	Brassica oleracea	97.09	0.00e+00	1251.00
IUUC-Csv-026196	Ciona savignyi	28.89	1.00e-11	65.90
IUUC-Gma-042863	Glycine max	62.92	0.00e+00	792.00
IUUC-Hvu-047325	Hordeum vulgare	54.13	8.00e-178	616.00
IUUC-Lpe-051266	Leersia perrieri	51.40	3.00e-171	595.00
IUUC-Mtr-058419	Medicago truncatula	62.73	0.00e+00	766.00
IUUC-Mac-065150	Musa acuminata	47.07	3.00e-158	551.00
IUUC-Oba-075533	Oryza barthii	55.28	2.00e-178	618.00
IUUC-Obr-076561	Oryza brachyantha	56.11	4.00e-180	624.00
IUUC-Ogl-077209	Oryza glaberrima	55.28	2.00e-178	618.00
IUUC-Ogu-078607	Oryza glumaepatula	55.44	4.00e-179	620.00
IUUC-Oin-080162	Oryza indica	55.44	3.00e-179	621.00
IUUC-Olo-080856	Oryza longistaminata	55.44	2.00e-179	621.00
IUUC-Ome-081763	Oryza meridionalis	55.44	1.00e-179	622.00
IUUC-Oni-082893	Oryza nivara	55.44	4.00e-179	620.00
IUUC-Opu-084068	Oryza punctata	55.44	1.00e-178	619.00
IUUC-Oru-085267	Oryza rufipogon	55.44	4.00e-179	620.00
IUUC-Osa-085448	Oryza sativa	55.44	4.00e-179	620.00
IUUC-Olu-087884	Ostreococcus lucimarinus	56.72	7.00e-23	97.80
IUUC-Pop-099995	Populus trichocarpa	66.07	0.00e+00	801.00
IUUC-Ppe-101219	Prunus persica	69.80	0.00e+00	847.00
IUUC-Sit-110533	Setaria italica	54.37	0.00e+00	646.00
IUUC-Sly-111424	Solanum lycopersicum	58.54	0.00e+00	736.00
IUUC-Stu-112097	Solanum tuberosum	59.00	0.00e+00	737.00
IUUC-Sbi-114691	Sorghum bicolor	54.00	4.00e-166	578.00
IUUC-Tca-121852	Theobroma cacao	66.07	0.00e+00	781.00
IUUC-Tae-122916	Triticum aestivum	54.13	1.00e-177	615.00
IUUC-Tur-126004	Triticum urartu	55.56	3.00e-167	581.00
IUUC-Vvi-131187	Vitis vinifera	67.59	0.00e+00	745.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence