iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112670

Ensembl Protein ID

PGSC0003DMT400015655

UniProt Accession

M1A6C6; M1A6C6_SOLTU

Protein Name

Auxin-responsive protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400006108	PGSC0003DMT400015655	PGSC0003DMT400015655
PGSC0003DMG400006108	PGSC0003DMT400015656	PGSC0003DMT400015656

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	1.50e-18	68.0	99	184

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 2    vrvkvsykgeirsfaldlekpgkfedLlkavrt.lt..........elknsevalkYeDedGDlvtlksDedldkavsllaskksllrl 79
           + vkvs++g+++++++d++ +  +++Llka++  ++          ++k+se+a+ YeD+dGDl+ l++D+++++++s      s++rl
   Q: 99   MYVKVSMDGAPYLRKIDVKMYKCYQELLKALENmFKltigeysereGYKGSEFAPAYEDKDGDLM-LVGDVPWEMFMS------SCKRL 180
           579******************************73366999999*9*******************.************......***** PP
   S: 80   liqk 83
           +i+k
   Q: 181  RIMK 184
           ***8 PP

Organism

Solanum tuberosum

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MTSIVGNQKD LNFKATELRL GLPGTEDQES DQEISNSKNN NKRALPESTH DEEDCESKSS 60
SDHVKTPPVA KAQIVGWPPV RSNRKNIIQP KKTESESGMY VKVSMDGAPY LRKIDVKMYK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAATTTCCT TTTTCCTTTC TCTTTATATA ACGGCAACCA ACCACTTGCA AAGACCTCAT 60
CTTTTTCTTG AAATACAACA AATTGCATTA CACAACTTCT TCTTTGTACC AAAGGATAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

sot:102592864

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005805	Arabidopsis lyrata	65.79	2.00e-62	229.00
IUUC-Ath-007370	Arabidopsis thaliana	67.72	1.00e-67	248.00
IUUC-Bol-015312	Brassica oleracea	70.21	1.00e-68	251.00
IUUC-Bra-018063	Brassica rapa	70.74	5.00e-69	252.00
IUUC-Cme-027333	Cyanidioschyzon merolae	33.33	3.20e-01	28.10
IUUC-Gma-043214	Glycine max	65.48	7.00e-70	254.00
IUUC-Hvu-047853	Hordeum vulgare	48.80	7.00e-42	162.00
IUUC-Meu-056851	Macropus eugenii	30.19	6.70e-01	26.90
IUUC-Mtr-058557	Medicago truncatula	64.74	1.00e-64	237.00
IUUC-Mac-064820	Musa acuminata	59.16	2.00e-58	217.00
IUUC-Obr-076144	Oryza brachyantha	48.06	3.00e-43	167.00
IUUC-Ogl-077720	Oryza glaberrima	44.49	2.00e-41	160.00
IUUC-Opu-083449	Oryza punctata	44.75	5.00e-34	136.00
IUUC-Pop-098896	Populus trichocarpa	65.80	4.00e-67	245.00
IUUC-Ppe-101322	Prunus persica	70.31	6.00e-75	271.00
IUUC-Sit-109772	Setaria italica	53.76	1.00e-46	179.00
IUUC-Sly-110939	Solanum lycopersicum	98.98	3.00e-105	372.00
IUUC-Sbi-114105	Sorghum bicolor	47.42	6.00e-43	165.00
IUUC-Tca-121147	Theobroma cacao	66.84	2.00e-70	256.00
IUUC-Vvi-131595	Vitis vinifera	66.16	5.00e-68	248.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence