iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-096025

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544993

Gene Name

PHYPADRAFT_47096

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S104_126V6	PP1S104_126V6.1	PP1S104_126V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.50e-07	31.0	44	99

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadCl..qkw.....pglknssskefrCPlCr 46
           C++C+e +   ++ p+vl CgH  +++C+    w      gl+ +   +++CP+C+
   Q: 44   CPVCWEILddrDNTPYVLWCGHSLCKSCVlnLEWatvklSGLPLQLPLFISCPWCQ 99
           ****9999555555**************966666999999999999*********7 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MSQELGNETT LMAPCECHSG YQPAPNPKIG TGSASRSLEE GLECPVCWEI LDDRDNTPYV 60
LWCGHSLCKS CVLNLEWATV KLSGLPLQLP LFISCPWCQF LTFRFKWKGQ LKYPCKNFFL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGGAGGGAA TCCCTCCCTC ACACCATGTG GCAGACGGAC AAGACAATCG AAGAGAGCAG 60
AAGAATCTCC AGAGATCCCA ATTCGCTGTT GTGGGCCATT ATAGTGGCGA AGGGAAGGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13445--zf-RING_UBOX

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

ppp:PHYPADRAFT_47096

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000568	Aegilops tauschii	44.78	4.00e-47	180.00
IUUC-Ath-007373	Arabidopsis thaliana	43.30	5.00e-49	186.00
IUUC-Bdi-014924	Brachypodium distachyon	46.64	2.00e-46	177.00
IUUC-Bra-017276	Brassica rapa	42.50	3.00e-51	194.00
IUUC-Cel-018621	Caenorhabditis elegans	31.30	6.00e-08	51.60
IUUC-Cne-027043	Cryptococcus neoformans	51.22	1.00e-06	47.00
IUUC-Dre-028408	Danio rerio	37.86	1.00e-06	47.40
IUUC-Gma-043252	Glycine max	48.26	1.00e-56	212.00
IUUC-Hvu-047109	Hordeum vulgare	45.29	2.00e-44	171.00
IUUC-Mac-065388	Musa acuminata	44.81	2.00e-53	201.00
IUUC-Obr-076124	Oryza brachyantha	51.56	3.00e-55	207.00
IUUC-Olo-080692	Oryza longistaminata	44.03	3.00e-50	191.00
IUUC-Pma-094162	Petromyzon marinus	32.76	3.00e-08	51.60
IUUC-Pfo-096032	Poecilia formosa	37.14	2.00e-07	49.70
IUUC-Pop-098992	Populus trichocarpa	45.83	4.00e-51	194.00
IUUC-Ppe-101521	Prunus persica	43.98	2.00e-49	188.00
IUUC-Sly-111787	Solanum lycopersicum	44.72	1.00e-57	215.00
IUUC-Stu-112131	Solanum tuberosum	45.96	2.00e-57	214.00
IUUC-Tru-118402	Takifugu rubripes	32.85	9.00e-08	50.40
IUUC-Tni-119737	Tetraodon nigroviridis	33.58	1.00e-07	49.70
IUUC-Tca-121818	Theobroma cacao	44.74	2.00e-45	175.00
IUUC-Tae-125903	Triticum aestivum	45.85	2.00e-45	174.00
IUUC-Tur-126036	Triticum urartu	46.29	5.00e-46	177.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence