iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093477

Ensembl Protein ID

ENSPSIP00000016820.1

UniProt Accession

K7G959; K7G959_PELSI

Genbank Protein ID

ENSPSIP00000016820

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGCU01006419

Gene Name

RAD23B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000014915.1	ENSPSIT00000016898.1	ENSPSIP00000016820.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.60e-19	69.4	172	209
ULD/UDP/UBQ/UBQ_PIM	1.20e-17	63.6	1	56

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           +e ++ ++++MG++re+++ aLra++nn+++AveyLl 
   Q: 172  YENMVTEIMSMGYEREQVIAALRASFNNPDRAVEYLLM 209
           5789********************************95 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 23   veelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           v++lKeki++e+g   +p++ qkLIyaGkiL+Ddt L+e++i+++++v+++v+k+k
   Q: 1    VKALKEKIESEKGkdaFPVAGQKLIYAGKILNDDTALKEYKIDEKNFVVVMVTKPK 56
           899**************************************************997 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

VKALKEKIES EKGKDAFPVA GQKLIYAGKI LNDDTALKEY KIDEKNFVVV MVTKPKAAAA 60
PTPSPATTQQ SNATTTTVSS TTTATAPAPA PAPLPVPAPP PAPSPPPTTP TPAAVASEPE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGAAGGCGC TGAAAGAGAA GATTGAATCA GAAAAGGGGA AAGATGCTTT CCCAGTAGCT 60
GGCCAAAAAC TAATTTATGC AGGTAATCGT TTCAGATCTA ATCTTTACTT CAGAAGATTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0071942--C:XPC complex
GO:0003684--F:damaged DNA binding
GO:0000715--P:nucleotide-excision repair, DNA damage recognition
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0032434--P:regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0007283--P:spermatogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000088	Aegilops tauschii	34.19	7.00e-24	104.00
IUUC-Aml-001195	Ailuropoda melanoleuca	84.25	4.00e-90	324.00
IUUC-Atr-003116	Amborella trichopoda	38.49	1.00e-31	130.00
IUUC-Apl-003371	Anas platyrhynchos	79.72	2.00e-95	342.00
IUUC-Aca-004599	Anolis carolinensis	82.07	6.00e-90	323.00
IUUC-Aly-005498	Arabidopsis lyrata	42.62	1.00e-41	164.00
IUUC-Ath-006676	Arabidopsis thaliana	42.86	3.00e-42	166.00
IUUC-Acl-008212	Aspergillus clavatus	48.09	3.00e-19	89.40
IUUC-Afl-008605	Aspergillus flavus	45.11	2.00e-19	89.70
IUUC-Afu-008877	Aspergillus fumigatus	47.33	6.00e-19	87.80
IUUC-Ani-009460	Aspergillus nidulans	48.85	2.00e-21	95.90
IUUC-Aor-010032	Aspergillus oryzae	45.11	3.00e-19	89.40
IUUC-Ate-010458	Aspergillus terreus	42.45	7.00e-30	124.00
IUUC-Ame-011107	Astyanax mexicanus	71.00	3.00e-34	139.00
IUUC-Bta-012922	Bos taurus	85.56	4.00e-89	321.00
IUUC-Bci-013933	Botrytis cinerea	50.38	8.00e-20	90.90
IUUC-Bdi-014253	Brachypodium distachyon	37.70	3.00e-32	132.00
IUUC-Bol-015641	Brassica oleracea	40.31	3.00e-40	159.00
IUUC-Bra-017983	Brassica rapa	40.82	2.00e-40	159.00
IUUC-Cel-018364	Caenorhabditis elegans	34.21	9.00e-19	87.00
IUUC-Cja-018772	Callithrix jacchus	87.04	3.00e-90	325.00
IUUC-Cfa-020683	Canis familiaris	81.85	7.00e-93	333.00
IUUC-Cpo-022145	Cavia porcellus	85.45	5.00e-95	340.00
IUUC-Cre-022810	Chlamydomonas reinhardtii	40.94	2.00e-21	96.70
IUUC-Csa-023714	Chlorocebus sabaeus	86.69	1.00e-103	369.00
IUUC-Cho-024814	Choloepus hoffmanni	64.52	4.00e-70	258.00
IUUC-Cin-025741	Ciona intestinalis	40.18	1.00e-35	143.00
IUUC-Cgl-026495	Colletotrichum gloeosporioides	46.32	3.00e-14	72.00
IUUC-Cne-027056	Cryptococcus neoformans	58.00	4.00e-11	62.00
IUUC-Cme-027260	Cyanidioschyzon merolae	27.59	1.00e-18	87.40
IUUC-Dre-028369	Danio rerio	70.92	2.00e-81	295.00
IUUC-Dno-029543	Dasypus novemcinctus	87.04	3.00e-91	328.00
IUUC-Dse-031336	Dothistroma septosporum	51.59	6.00e-18	84.70
IUUC-Dme-032027	Drosophila melanogaster	39.13	1.00e-44	173.00
IUUC-Ete-032583	Echinops telfairi	73.22	2.00e-61	229.00
IUUC-Eca-034243	Equus caballus	87.45	3.00e-87	315.00
IUUC-Eeu-034721	Erinaceus europaeus	83.33	1.00e-69	256.00
IUUC-Fca-035679	Felis catus	85.19	3.00e-89	321.00
IUUC-Fal-037148	Ficedula albicollis	81.27	3.00e-89	321.00
IUUC-Gmo-039080	Gadus morhua	77.52	1.00e-40	159.00
IUUC-Ggr-040116	Gaeumannomyces graminis	46.56	3.00e-16	79.00
IUUC-Gga-040544	Gallus gallus	79.36	1.00e-94	339.00
IUUC-Gac-042239	Gasterosteus aculeatus	62.31	6.00e-65	240.00
IUUC-Gma-043937	Glycine max	39.02	9.00e-40	157.00
IUUC-Ggo-045125	Gorilla gorilla	88.98	1.00e-95	342.00
IUUC-Hsa-046519	Homo sapiens	88.98	1.00e-95	342.00
IUUC-Hvu-047832	Hordeum vulgare	37.30	5.00e-32	131.00
IUUC-Itr-048295	Ictidomys tridecemlineatus	84.07	4.00e-82	298.00
IUUC-Kpa-049314	Komagataella pastoris	34.78	2.00e-29	122.00
IUUC-Lch-050553	Latimeria chalumnae	74.72	2.00e-79	288.00
IUUC-Lpe-050929	Leersia perrieri	34.23	3.00e-34	139.00
IUUC-Loc-051748	Lepisosteus oculatus	74.79	2.00e-74	271.00
IUUC-Laf-054293	Loxodonta africana	86.30	2.00e-89	322.00
IUUC-Mcc-055600	Macaca mulatta	87.04	1.00e-99	355.00
IUUC-Mpo-057609	Magnaporthe poae	46.83	8.00e-16	77.40
IUUC-Mtr-058148	Medicago truncatula	39.45	1.00e-40	160.00
IUUC-Mla-058961	Melampsora laricipopulina	45.11	2.00e-24	106.00
IUUC-Mga-060060	Meleagris gallopavo	44.39	3.00e-14	72.00
IUUC-Mvi-060220	Microbotryum violaceum	42.86	7.00e-21	95.10
IUUC-Mmr-061159	Microcebus murinus	89.02	3.00e-91	328.00
IUUC-Mdo-061967	Monodelphis domestica	89.50	1.00e-83	302.00
IUUC-Mmu-063258	Mus musculus	82.97	1.00e-99	356.00
IUUC-Mac-065180	Musa acuminata	39.00	3.00e-38	152.00
IUUC-Mpu-066389	Mustela putorius furo	84.25	4.00e-89	321.00
IUUC-Mlu-067999	Myotis lucifugus	83.46	1.00e-87	316.00
IUUC-Nfi-068390	Neosartorya fischeri	47.33	6.00e-19	87.80
IUUC-Ncr-068685	Neurospora crassa	45.80	2.00e-24	106.00
IUUC-Nle-069655	Nomascus leucogenys	87.04	5.00e-100	357.00
IUUC-Opr-070234	Ochotona princeps	98.08	4.00e-24	105.00
IUUC-Ont-072484	Oreochromis niloticus	63.18	5.00e-71	261.00
IUUC-Ocu-074831	Oryctolagus cuniculus	85.98	3.00e-89	322.00
IUUC-Oba-075872	Oryza barthii	41.61	2.00e-25	109.00
IUUC-Obr-076660	Oryza brachyantha	36.99	3.00e-36	145.00
IUUC-Ogl-077021	Oryza glaberrima	41.61	2.00e-25	109.00
IUUC-Ogu-078101	Oryza glumaepatula	34.75	9.00e-33	134.00
IUUC-Oin-079203	Oryza indica	35.34	2.00e-36	145.00
IUUC-Olo-080559	Oryza longistaminata	37.17	9.00e-37	147.00
IUUC-Ome-081377	Oryza meridionalis	41.12	5.00e-17	80.10
IUUC-Oni-082847	Oryza nivara	41.61	2.00e-25	109.00
IUUC-Opu-083963	Oryza punctata	36.93	2.00e-36	146.00
IUUC-Oru-084942	Oryza rufipogon	35.88	7.00e-37	147.00
IUUC-Osa-085951	Oryza sativa	35.34	2.00e-36	145.00
IUUC-Ola-086540	Oryzias latipes	61.11	2.00e-63	235.00
IUUC-Olu-087843	Ostreococcus lucimarinus	42.73	9.00e-39	154.00
IUUC-Oga-088023	Otolemur garnettii	85.71	3.00e-90	325.00
IUUC-Oar-089964	Ovis aries	84.44	4.00e-87	314.00
IUUC-Ptr-091165	Pan troglodytes	88.98	2.00e-95	342.00
IUUC-Pan-092009	Papio anubis	85.71	5.00e-98	350.00
IUUC-Pno-095064	Phaeosphaeria nodorum	47.90	3.00e-13	69.30
IUUC-Ppa-095964	Physcomitrella patens	45.38	2.00e-27	116.00
IUUC-Pab-097868	Pongo abelii	88.98	6.00e-95	340.00
IUUC-Pop-099642	Populus trichocarpa	38.98	4.00e-41	161.00
IUUC-Pca-100652	Procavia capensis	90.10	2.00e-64	238.00
IUUC-Ppe-101368	Prunus persica	38.04	6.00e-39	154.00
IUUC-Pva-102137	Pteropus vampyrus	87.45	9.00e-92	330.00
IUUC-Pgr-103641	Puccinia graminis	45.32	5.00e-15	75.10
IUUC-Ptt-103717	Puccinia triticina	45.45	1.00e-26	114.00
IUUC-Pte-104303	Pyrenophora teres	50.75	3.00e-20	92.40
IUUC-Pyt-104580	Pyrenophora triticirepentis	50.75	4.00e-20	91.70
IUUC-Rno-104844	Rattus norvegicus	83.64	4.00e-100	357.00
IUUC-Sce-106214	Saccharomyces cerevisiae	35.77	2.00e-14	72.80
IUUC-Sha-107073	Sarcophilus harrisii	90.34	3.00e-84	305.00
IUUC-Sja-107851	Schizosaccharomyces japonicus	44.58	1.00e-38	153.00
IUUC-Spo-108298	Schizosaccharomyces pombe	42.39	2.00e-36	146.00
IUUC-Smo-109518	Selaginella moellendorffii	45.00	4.00e-21	95.10
IUUC-Sit-110235	Setaria italica	36.76	1.00e-32	134.00
IUUC-Sly-111480	Solanum lycopersicum	40.24	1.00e-42	166.00
IUUC-Stu-112054	Solanum tuberosum	38.96	7.00e-40	157.00
IUUC-Sar-112925	Sorex araneus	75.65	6.00e-81	293.00
IUUC-Sbi-113871	Sorghum bicolor	36.43	5.00e-32	131.00
IUUC-Sre-114894	Sporisorium reilianum	52.46	3.00e-11	62.80
IUUC-Ssc-116329	Sus scrofa	85.56	4.00e-90	324.00
IUUC-Tgu-116918	Taeniopygia guttata	80.54	6.00e-91	327.00
IUUC-Tru-118651	Takifugu rubripes	57.20	3.00e-70	258.00
IUUC-Tsy-118836	Tarsius syrichta	88.24	8.00e-46	177.00
IUUC-Tni-120493	Tetraodon nigroviridis	63.68	6.00e-70	257.00
IUUC-Tca-121594	Theobroma cacao	39.15	4.00e-38	151.00
IUUC-Tre-121911	Trichoderma reesei	47.62	1.00e-16	80.10
IUUC-Tvi-122617	Trichoderma virens	46.56	1.00e-16	80.50
IUUC-Tae-123231	Triticum aestivum	38.22	1.00e-35	143.00
IUUC-Tur-126144	Triticum urartu	30.62	2.00e-24	106.00
IUUC-Tme-127092	Tuber melanosporum	52.67	5.00e-21	95.10
IUUC-Tbe-127493	Tupaia belangeri	71.79	6.00e-63	234.00
IUUC-Ttr-128464	Tursiops truncatus	85.19	6.00e-90	323.00
IUUC-Uma-129484	Ustilago maydis	53.06	3.00e-11	62.80
IUUC-Vda-129946	Verticillium dahliae	48.09	7.00e-18	84.30
IUUC-Vpa-130357	Vicugna pacos	81.12	1.00e-58	219.00
IUUC-Vvi-130842	Vitis vinifera	37.14	3.00e-38	152.00
IUUC-Xtr-132679	Xenopus tropicalis	75.48	1.00e-66	246.00
IUUC-Xma-133647	Xiphophorus maculatus	65.52	1.00e-62	233.00
IUUC-Yli-134615	Yarrowia lipolytica	41.01	3.00e-37	148.00
IUUC-Zma-135678	Zea mays	37.14	3.00e-33	135.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence