iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111209

Ensembl Protein ID

Solyc10g078520.1.1

UniProt Accession

K4D294; K4D294_SOLLC

Protein Name

PHD finger protein ING

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc10g078520.1	Solyc10g078520.1.1	Solyc10g078520.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.10e-09	37.6	205	255

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCek..Cr..ewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C vC++ + ++  ++ C++  C+  ewfH++C++l+  e++ +  kw+Cp Cr+
   Q: 205  TYC-VCHQVSFGD--MIACDNenCQggEWFHYTCVGLT-PETRFKG-KWYCPTCRQ 255
           69*.********9..*****999*999***********.4444444.4******97 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MAIARTGVFV DDYLEYSSTL PAELQRLLNT IRELDERSQG IINQTRQQTN YCLGLASQSQ 60
GSRKYNYDDD EAFEKLRKEI EGNQDNALSL CTEKVLLARQ AHDIIDSHIK RLDEDLANFA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGATCG CCAGAACCGG AGTCTTCGTC GATGATTACT TGGAATGTAT GTTTAATTTT 60
TGGAATATTC TTTTTTTTAA AAATTTAATT ATGCTTTTTT TTTACCTTGT GAAGTTTGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR028652--ING2_plant-typ
IPR028651--ING_fam
IPR024610--ING_N_histone_binding
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50016--ZF_PHD_2

Pfam

PF12998--ING

SMART

SM01408--ING
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding
GO:0016569--P:covalent chromatin modification

KEGG

sly:101245213

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002435	Amborella trichopoda	74.02	1.00e-98	351.00
IUUC-Ath-006578	Arabidopsis thaliana	76.14	8.00e-103	365.00
IUUC-Bdi-014508	Brachypodium distachyon	66.93	3.00e-95	340.00
IUUC-Bol-015751	Brassica oleracea	76.72	1.00e-106	377.00
IUUC-Bra-017962	Brassica rapa	77.74	1.00e-106	377.00
IUUC-Dse-031323	Dothistroma septosporum	59.65	2.00e-16	80.50
IUUC-Gma-044224	Glycine max	77.36	3.00e-106	377.00
IUUC-Hvu-047275	Hordeum vulgare	66.67	8.00e-97	345.00
IUUC-Lpe-051512	Leersia perrieri	64.98	8.00e-93	332.00
IUUC-Mtr-058288	Medicago truncatula	74.16	7.00e-110	389.00
IUUC-Mac-065671	Musa acuminata	73.73	2.00e-106	377.00
IUUC-Mlu-067754	Myotis lucifugus	34.33	3.00e-33	134.00
IUUC-Obr-076822	Oryza brachyantha	69.26	8.00e-102	362.00
IUUC-Ogl-077432	Oryza glaberrima	68.87	1.00e-101	361.00
IUUC-Osa-085802	Oryza sativa	68.87	1.00e-101	361.00
IUUC-Olu-087851	Ostreococcus lucimarinus	61.11	3.00e-17	80.90
IUUC-Ppa-096009	Physcomitrella patens	59.70	4.00e-85	306.00
IUUC-Pop-099544	Populus trichocarpa	77.53	6.00e-105	372.00
IUUC-Ppe-101698	Prunus persica	75.94	4.00e-99	353.00
IUUC-Smo-108678	Selaginella moellendorffii	63.28	2.00e-85	307.00
IUUC-Sit-110189	Setaria italica	69.92	3.00e-99	353.00
IUUC-Stu-112762	Solanum tuberosum	99.61	2.00e-131	460.00
IUUC-Sbi-114379	Sorghum bicolor	68.75	1.00e-100	358.00
IUUC-Tca-121271	Theobroma cacao	79.62	6.00e-109	385.00
IUUC-Tre-121950	Trichoderma reesei	58.73	3.00e-18	86.70
IUUC-Tae-122798	Triticum aestivum	67.05	3.00e-97	347.00
IUUC-Vvi-131583	Vitis vinifera	82.63	1.00e-111	394.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence