iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095614

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545323

Gene Name

PHYPADRAFT_154832

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S441_24V6	PP1S441_24V6.1	PP1S441_24V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-06	29.6	196	232

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H++ + +l+f  d  +++s sdD  +++WD+ +g+++ 
   Q: 196  HKS-IKDLDFsLDgAFVASTSDDSACRIWDVASGTCVS 232
           555.89999996658899*****************986 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MLESIMNKEG RYLLCSKKYG RPLFAGAWLA PLTTKKKKEE EERNGEGDEE GEVFPKEAQE 60
GVVVLAGGGG NQRNGVPNSL LLAEYDFKST LLTDALDTYS TGDDTPLRLA AHPAGEGVVC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTCGCGAAC TCATATCTTC GAAGGTTTTG GGCTGCTGGT GAAAGTTGGA GTTGGGTTTT 60
GTGGAGTTGG GTTATTTTCG CATCGTGTGT GATTGTGGAT GTTGGAATCT ATCATGAACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0677--Repeat
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030176--C:integral component of endoplasmic reticulum membrane
GO:0005096--F:GTPase activator activity
GO:0051020--F:GTPase binding
GO:0005090--F:Sar guanyl-nucleotide exchange factor activity
GO:0009306--P:protein secretion
GO:0003400--P:regulation of COPII vesicle coating

KEGG

ppp:PHYPADRAFT_154832

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Mac-064955	Musa acuminata	39.83	2.00e-64	238.00
IUUC-Pop-099618	Populus trichocarpa	36.90	2.00e-58	218.00
IUUC-Pgr-103489	Puccinia graminis	21.64	2.00e-06	46.20
IUUC-Smo-109265	Selaginella moellendorffii	47.90	8.00e-69	253.00
IUUC-Sly-111551	Solanum lycopersicum	38.72	2.00e-53	202.00
IUUC-Stu-112264	Solanum tuberosum	40.60	2.00e-52	199.00
IUUC-Sre-115183	Sporisorium reilianum	38.04	6.00e-15	74.70
IUUC-Uma-129598	Ustilago maydis	30.00	9.00e-15	74.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence