iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ogu-077957

Ensembl Protein ID

OGLUM02G19060.1

UniProt Accession

A0A0D9YT17; A0A0D9YT17_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OGLUM02G19060	OGLUM02G19060.1	OGLUM02G19060.1
OGLUM02G19060	OGLUM02G19060.2	OGLUM02G19060.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.30e-07	33.1	752	792

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C+iCle f+d  +++pC H  +++Cl   w      s  + +CP+Cr
   Q: 752  CPICLEAFED-AVLTPCAHRLCRECLlSSW-----RSASAGLCPVCR 792
           **********.888***********99999.....4555667****8 PP

Organism

Oryza glumaepatula

Protein Sequence
(Fasta)

MGKERGREEQ VATVRAVLGD GTPEMDIIRA LHMAGDDPTR AINILLDFPH GPPPPPPPSP 60
SPSPSPPAGK PTKPHPESTP PTKTPARSKP AAAAAEKPRP SVAPESTNGG GGGGEHWWLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGAAGG AGAGGGGAAG GGAGGAGCAG GTGGCGACGG TGCGCGCGGT GCTCGGCGAT 60
GGGACGCCGG AGATGGACAT CATCCGCGCG CTCCACATGG CCGGCGACGA CCCCACCAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR014905--HIRAN
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00271--Helicase_C
PF08797--HIRAN
PF00176--SNF2_N

SMART

SM00487--DEXDc
SM00490--HELICc
SM00910--HIRAN
SM00184--RING

Gene Ontology

GO:0005524--F:ATP binding
GO:0016818--F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0003676--F:nucleic acid binding
GO:0008270--F:zinc ion binding
GO:0009294--P:DNA mediated transformation
GO:0045003--P:double-strand break repair via synthesis-dependent strand annealing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003139	Amborella trichopoda	61.34	0.00e+00	1256.00
IUUC-Aly-006331	Arabidopsis lyrata	61.72	0.00e+00	1234.00
IUUC-Ath-007517	Arabidopsis thaliana	62.19	0.00e+00	1237.00
IUUC-Bdi-014646	Brachypodium distachyon	81.01	0.00e+00	1567.00
IUUC-Bol-015484	Brassica oleracea	63.52	0.00e+00	1176.00
IUUC-Bra-016925	Brassica rapa	60.06	0.00e+00	1209.00
IUUC-Gma-042995	Glycine max	62.05	0.00e+00	1254.00
IUUC-Hvu-047495	Hordeum vulgare	80.25	0.00e+00	1289.00
IUUC-Lpe-051584	Leersia perrieri	89.40	0.00e+00	1673.00
IUUC-Mtr-058565	Medicago truncatula	58.60	0.00e+00	1189.00
IUUC-Mac-065174	Musa acuminata	54.30	0.00e+00	662.00
IUUC-Oba-075937	Oryza barthii	99.65	0.00e+00	1713.00
IUUC-Obr-076403	Oryza brachyantha	84.27	0.00e+00	1616.00
IUUC-Ogl-077573	Oryza glaberrima	95.44	0.00e+00	1877.00
IUUC-Oin-079146	Oryza indica	94.67	0.00e+00	1798.00
IUUC-Olo-080437	Oryza longistaminata	87.78	0.00e+00	1488.00
IUUC-Ome-081448	Oryza meridionalis	93.35	0.00e+00	1800.00
IUUC-Oni-082389	Oryza nivara	98.47	0.00e+00	1789.00
IUUC-Opu-083322	Oryza punctata	92.67	0.00e+00	1733.00
IUUC-Oru-085066	Oryza rufipogon	99.39	0.00e+00	1821.00
IUUC-Osa-085686	Oryza sativa	94.32	0.00e+00	1512.00
IUUC-Ppa-095877	Physcomitrella patens	53.13	0.00e+00	975.00
IUUC-Pop-099320	Populus trichocarpa	62.42	0.00e+00	1276.00
IUUC-Ppe-101820	Prunus persica	61.41	0.00e+00	1235.00
IUUC-Smo-108977	Selaginella moellendorffii	70.03	1.00e-151	528.00
IUUC-Sit-110076	Setaria italica	81.55	0.00e+00	1559.00
IUUC-Sly-111908	Solanum lycopersicum	66.70	0.00e+00	1220.00
IUUC-Sbi-113927	Sorghum bicolor	81.58	0.00e+00	1562.00
IUUC-Tca-121137	Theobroma cacao	61.66	0.00e+00	1287.00
IUUC-Tae-124722	Triticum aestivum	80.10	0.00e+00	1535.00
IUUC-Tur-126433	Triticum urartu	79.89	0.00e+00	1129.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence