iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114220

Ensembl Protein ID

Sb04g020490.1

UniProt Accession

C5XSJ7; C5XSJ7_SORBI

Genbank Protein ID

EES05114.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G153200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g020490	Sb04g020490.1	Sb04g020490.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.40e-06	29.1	116	155

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraa.nnnleaAveyLldg 41
           ++++l  l+ MGF++ +a +aL  + n ++e A+++L ++
   Q: 116  NKEMLTDLEGMGFSTARATRALHFSgNSTIEGAINWLSEH 155
           899**********************************987 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAGLSLRCGD CGAQLRSVEE AQAHAEATNH ANFVESTEAV LNLVCSDCGK PCRSQTEVDL 60
HTKRTGHTEF ADKTAEAAKP IDLEAPLKPA SEDAMDVDAS ASASAEPQEM VVPEVNKEML 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACTCGTCAT TAACTCCTTA AAAACCTCGC GAGAAGAGTC GAGAGCGCGA GCACCTACCT 60
GTGTCGCCGA TTTGGCCCCA AATCCGCTGA GGGGCTCGAG CCGATCAAGG CGTCATCTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR018997--PUB_domain
IPR015940--UBA
IPR009060--UBA-like
IPR013087--Znf_C2H2_type

PROSITE

PS50030--UBA
PS00028--ZINC_FINGER_C2H2_1

Pfam

PF09409--PUB
PF00627--UBA

SMART

SM00580--PUG
SM00165--UBA

Gene Ontology

GO:0046872--F:metal ion binding

KEGG

sbi:SORBI_04g020490

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001103	Aegilops tauschii	82.81	2.00e-87	315.00
IUUC-Atr-002907	Amborella trichopoda	65.98	5.00e-72	263.00
IUUC-Aly-005639	Arabidopsis lyrata	73.92	7.00e-149	519.00
IUUC-Ath-006887	Arabidopsis thaliana	73.44	7.00e-146	509.00
IUUC-Bdi-014311	Brachypodium distachyon	89.66	8.00e-170	588.00
IUUC-Bol-016537	Brassica oleracea	73.08	8.00e-148	515.00
IUUC-Bra-017212	Brassica rapa	76.09	3.00e-146	511.00
IUUC-Gma-043416	Glycine max	74.28	1.00e-135	475.00
IUUC-Hvu-047779	Hordeum vulgare	90.06	5.00e-67	246.00
IUUC-Lpe-051322	Leersia perrieri	92.55	7.00e-174	602.00
IUUC-Mtr-058099	Medicago truncatula	70.98	5.00e-136	476.00
IUUC-Mac-065072	Musa acuminata	64.86	1.00e-65	242.00
IUUC-Oan-073484	Ornithorhynchus anatinus	42.37	1.00e-09	57.40
IUUC-Oba-075451	Oryza barthii	92.81	6.00e-172	595.00
IUUC-Obr-076923	Oryza brachyantha	92.75	1.00e-164	572.00
IUUC-Ogu-078589	Oryza glumaepatula	93.05	4.00e-173	600.00
IUUC-Oin-079151	Oryza indica	92.81	1.00e-172	598.00
IUUC-Olo-080934	Oryza longistaminata	82.21	5.00e-142	496.00
IUUC-Ome-081253	Oryza meridionalis	91.61	2.00e-169	587.00
IUUC-Opu-083336	Oryza punctata	93.05	4.00e-173	599.00
IUUC-Oru-085235	Oryza rufipogon	93.05	7.00e-173	598.00
IUUC-Osa-085611	Oryza sativa	93.05	7.00e-173	598.00
IUUC-Olu-087606	Ostreococcus lucimarinus	44.00	3.00e-25	108.00
IUUC-Pma-094284	Petromyzon marinus	53.06	1.00e-08	50.10
IUUC-Ppa-095484	Physcomitrella patens	68.27	4.00e-124	437.00
IUUC-Pop-099678	Populus trichocarpa	76.68	2.00e-155	541.00
IUUC-Ppe-101243	Prunus persica	71.79	6.00e-103	366.00
IUUC-Smo-109480	Selaginella moellendorffii	64.62	4.00e-117	413.00
IUUC-Sit-109874	Setaria italica	93.79	1.00e-176	611.00
IUUC-Sly-111766	Solanum lycopersicum	71.70	2.00e-139	488.00
IUUC-Stu-112122	Solanum tuberosum	71.53	6.00e-138	483.00
IUUC-Tca-121495	Theobroma cacao	75.78	2.00e-147	514.00
IUUC-Tae-124335	Triticum aestivum	86.32	1.00e-90	326.00
IUUC-Tur-126615	Triticum urartu	86.32	1.00e-90	325.00
IUUC-Uma-129569	Ustilago maydis	41.67	2.00e-03	35.40
IUUC-Vvi-131064	Vitis vinifera	71.05	3.00e-78	284.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence