iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007235

UUCD1 version

UUC-ArT-00688

Ensembl Protein ID

AT5G59550.2

UniProt Accession

Q940T5; Q9LTH6; RDUF2_ARATH

Genbank Protein ID

BAA97489.1; AED97204.1; AAK96615.1; AAL36069.1

Protein Name

E3 ubiquitin-protein ligase RDUF2; RING and DUF1117 domain-containing protein 2; RING-type E3 ubiquitin transferase RDUF2

Genbank Nucleotide ID

AB025604; CP002688; AY052711; AY063719

Gene Name

DURF2; At5g59550; F2O15.22

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT5G59550	AT5G59550.2	AT5G59550.2

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
Mentha
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.00e-07	32.3	304	345

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C e f  +++ + +pC+H+fh dC+  w       s + +CP+Cr
   Q: 304  CAVCTEIFetETEAREMPCKHLFHDDCIVPW------LSIRNSCPVCR 345
           ******9965444888***************......**********8 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

E3 ubiquitin-protein ligase involved in the positive regulation of abscisic acid-dependent drought stress responses. Possesses E3 ubiquitin ligase activity in vitro.

Protein Sequence
(Fasta)

MDPTNSRHGA SFEFSTRRFT LSTFGQNAPS LYVTTVYNSA IIYPVKHSPR VYLPSNPTPL 60
IPLLRIALKT TFSFSHLQTS LSLLWSAILL SSSSQILSPS KKILKMPSTP TTPTTTTPIT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCCACCTCAT TGGTCGACAT TATAAAATAC AGTAGTATAT CACAAATTGT TTAATGAAAT 60
TCATTTTAAA AAAAGAAGAA AAAATAGTTA AAAAGTGATA TAATTATTTT GCAGTTAGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0938--Abscisic acid signaling pathway
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0346--Stress response
KW-0808--Transferase
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR010543--DUF1117
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF06547--DUF1117
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005829--C:cytosol
GO:0061630--F:ubiquitin protein ligase activity
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0009738--P:abscisic acid-activated signaling pathway
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0051865--P:protein autoubiquitination
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0009737--P:response to abscisic acid
GO:0010200--P:response to chitin
GO:0009414--P:response to water deprivation

KEGG

ath:AT5G59550

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005531	Arabidopsis lyrata	95.64	1.00e-140	491.00
IUUC-Bdi-014752	Brachypodium distachyon	46.52	2.00e-64	238.00
IUUC-Bol-016549	Brassica oleracea	75.73	5.00e-127	446.00
IUUC-Bra-017069	Brassica rapa	73.54	6.00e-119	420.00
IUUC-Gma-043139	Glycine max	52.25	9.00e-70	256.00
IUUC-Itr-048618	Ictidomys tridecemlineatus	55.41	3.00e-21	93.60
IUUC-Lpe-051386	Leersia perrieri	51.01	3.00e-70	258.00
IUUC-Meu-056718	Macropus eugenii	51.76	5.00e-22	96.30
IUUC-Mtr-057991	Medicago truncatula	53.27	1.00e-71	262.00
IUUC-Mac-065350	Musa acuminata	51.69	3.00e-68	251.00
IUUC-Oba-075196	Oryza barthii	42.95	9.00e-44	169.00
IUUC-Obr-076880	Oryza brachyantha	50.66	3.00e-41	160.00
IUUC-Ogl-077103	Oryza glaberrima	49.67	2.00e-67	248.00
IUUC-Ogu-078379	Oryza glumaepatula	44.92	2.00e-49	188.00
IUUC-Oin-080146	Oryza indica	44.92	2.00e-49	188.00
IUUC-Ome-081205	Oryza meridionalis	50.67	2.00e-68	251.00
IUUC-Oni-082393	Oryza nivara	50.67	2.00e-67	248.00
IUUC-Opu-084123	Oryza punctata	44.92	1.00e-49	189.00
IUUC-Oru-084888	Oryza rufipogon	50.67	2.00e-67	248.00
IUUC-Osa-085474	Oryza sativa	57.47	1.00e-60	225.00
IUUC-Ptt-103768	Puccinia triticina	41.35	3.00e-15	76.30
IUUC-Sha-106578	Sarcophilus harrisii	52.70	2.00e-21	94.00
IUUC-Sit-109708	Setaria italica	43.43	6.00e-47	180.00
IUUC-Sly-110949	Solanum lycopersicum	51.52	2.00e-73	268.00
IUUC-Stu-112595	Solanum tuberosum	53.09	2.00e-66	245.00
IUUC-Sbi-114707	Sorghum bicolor	53.51	2.00e-48	185.00
IUUC-Tca-121520	Theobroma cacao	53.33	3.00e-71	261.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence