iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Hvu-047100

Ensembl Protein ID

MLOC_72504.3

UniProt Accession

F2D6F7; F2D6F7_HORVV

Genbank Protein ID

BAJ90678.1; BAK01273.1

Protein Name

Predicted protein

Genbank Nucleotide ID

AK359469; AK370072

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MLOC_72504	MLOC_72504.3	MLOC_72504.3
MLOC_72504	MLOC_72504.2	MLOC_72504.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	4.20e-08	34.3	202	253

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrsk 54
           + C  Cg  ++ e+  + C+ C++w+H +C+k++   + ++ +++ Cp+C+sk
   Q: 202  TLCGTCGGIYSAEEFWIGCDVCERWYHGKCVKIT-PAKAESIKQYKCPSCSSK 253
           689*******************************.888888889******975 PP

Organism

Hordeum vulgare

Protein Sequence
(Fasta)

MDASYRRSGA GGGGGSAPRT VEDIFKDYRA RRNAIHRALT HDVEEFYAQC DPEKENLCLY 60
GYANEAWEVA LPAEEVPTEL PEPALGINFA RDGMKRSDWL ALVAVHSDSW LVSVAFYYAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCTGCCTCT GTCTCCCGCA TCGCGATCAG TCATCTCCTC TCAGCCTCCC CCGCCTCGCC 60
GGAGATCACG AGAGGCGCCG GCCCCCGTCC CCGCGATGGA CGCCTCCTAC CGCCGTTCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR021998--Alfin
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF12165--Alfin
PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding
GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001165	Aegilops tauschii	89.58	3.00e-120	422.00
IUUC-Atr-002475	Amborella trichopoda	65.83	5.00e-80	289.00
IUUC-Aca-005148	Anolis carolinensis	47.83	3.00e-10	59.70
IUUC-Aly-005868	Arabidopsis lyrata	56.50	7.00e-66	242.00
IUUC-Ath-007447	Arabidopsis thaliana	56.10	2.00e-65	240.00
IUUC-Ang-009560	Aspergillus niger	58.82	6.00e-07	48.50
IUUC-Ame-010924	Astyanax mexicanus	43.64	1.00e-09	58.90
IUUC-Bdi-014258	Brachypodium distachyon	92.50	6.00e-125	438.00
IUUC-Bol-015692	Brassica oleracea	53.14	3.00e-58	216.00
IUUC-Bra-017743	Brassica rapa	51.63	6.00e-59	219.00
IUUC-Cja-018809	Callithrix jacchus	50.00	7.00e-11	61.20
IUUC-Cpo-021892	Cavia porcellus	50.00	4.00e-10	60.50
IUUC-Cin-025225	Ciona intestinalis	42.55	2.00e-09	56.20
IUUC-Csv-026235	Ciona savignyi	44.68	1.00e-09	55.10
IUUC-Cne-026898	Cryptococcus neoformans	47.50	6.00e-07	48.90
IUUC-Dno-029508	Dasypus novemcinctus	49.06	7.00e-11	62.80
IUUC-Dor-030950	Dipodomys ordii	50.00	3.00e-10	61.20
IUUC-Dse-031262	Dothistroma septosporum	51.35	2.00e-06	46.60
IUUC-Gma-043719	Glycine max	65.27	1.00e-76	278.00
IUUC-Ggo-045377	Gorilla gorilla	50.00	2.00e-10	60.50
IUUC-Itr-048740	Ictidomys tridecemlineatus	50.00	4.00e-10	60.50
IUUC-Kpa-049384	Komagataella pastoris	34.62	4.00e-05	41.60
IUUC-Lpe-050738	Leersia perrieri	87.55	5.00e-120	422.00
IUUC-Mtr-058517	Medicago truncatula	64.02	3.00e-76	276.00
IUUC-Mac-064648	Musa acuminata	71.67	6.00e-88	315.00
IUUC-Oba-075021	Oryza barthii	81.14	3.00e-110	389.00
IUUC-Ogl-077422	Oryza glaberrima	87.98	2.00e-113	400.00
IUUC-Ogu-079021	Oryza glumaepatula	80.99	8.00e-110	388.00
IUUC-Oin-079801	Oryza indica	88.33	3.00e-112	396.00
IUUC-Olo-080963	Oryza longistaminata	73.55	1.00e-53	201.00
IUUC-Ome-081881	Oryza meridionalis	87.94	4.00e-114	402.00
IUUC-Oni-082314	Oryza nivara	88.33	3.00e-112	396.00
IUUC-Opu-083359	Oryza punctata	87.26	5.00e-113	398.00
IUUC-Oru-085108	Oryza rufipogon	85.83	3.00e-99	353.00
IUUC-Osa-086138	Oryza sativa	85.51	3.00e-59	220.00
IUUC-Olu-087829	Ostreococcus lucimarinus	61.03	1.00e-38	151.00
IUUC-Pan-092346	Papio anubis	49.06	9.00e-12	64.70
IUUC-Ppa-095988	Physcomitrella patens	58.50	1.00e-81	294.00
IUUC-Pop-099768	Populus trichocarpa	56.56	8.00e-66	241.00
IUUC-Pca-100922	Procavia capensis	50.00	5.00e-10	60.50
IUUC-Ppe-101614	Prunus persica	65.42	4.00e-75	272.00
IUUC-Sce-106445	Saccharomyces cerevisiae	32.65	1.00e-03	36.60
IUUC-Smo-109237	Selaginella moellendorffii	48.75	4.00e-53	199.00
IUUC-Sit-110822	Setaria italica	69.85	5.00e-45	173.00
IUUC-Sly-111705	Solanum lycopersicum	62.76	4.00e-76	276.00
IUUC-Stu-112072	Solanum tuberosum	62.34	1.00e-75	274.00
IUUC-Tgu-117339	Taeniopygia guttata	47.83	3.00e-10	59.70
IUUC-Tca-121204	Theobroma cacao	68.62	2.00e-78	283.00
IUUC-Tae-124170	Triticum aestivum	99.22	1.00e-128	450.00
IUUC-Vda-129733	Verticillium dahliae	45.71	1.00e-05	45.40
IUUC-Vpa-130338	Vicugna pacos	50.00	6.00e-10	60.10
IUUC-Vvi-131738	Vitis vinifera	67.36	8.00e-80	288.00
IUUC-Yli-134626	Yarrowia lipolytica	42.11	1.00e-04	40.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence