iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID	iRefIndex	Mentha
Protein Expression/Proteomics

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/RING	RING	15530417

Classification

Family	E-value	Score	Start	End
E3 activity/RING/RING	1.40e-05	25.8	105	149

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C+iCl   +  p++++CgH+f+ +C+ q w+++k    +   C  Cr
   Q: 105  CPICLANASF-PVLTDCGHIFCCECIiQYWQQSK-AIVTPCDCAMCR 149
           ****996655.999***********989993333.444444477886 PP

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MEQGVPATSS EIPPFTENIT IPEVVSETVT EPDEDWLWPS DPDVELATQI TMAIAVIFIV 60
KAIFDAWQSR RRQRAASRMD ENAERNQIIT QRRISEALHQ SSHECPICLA NASFPVLTDC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAAAACTAG TAAAAATCAT GGAGCAAGGT GTGCCTGCCA CAAGTTCAGA GATCCCGCCA 60
TTTACAGAAA GTAAGTTTGG GAAAATGATG GGGGAATTTT ATGTTTTTTT CTCAATAATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR010652--DUF1232
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF06803--DUF1232

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

cel:CELE_Y38F1A.2

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000837	Aegilops tauschii	23.03	1.00e-10	58.20
IUUC-Aml-002276	Ailuropoda melanoleuca	33.13	7.00e-22	95.90
IUUC-Atr-003163	Amborella trichopoda	32.67	2.00e-19	87.80
IUUC-Apl-003771	Anas platyrhynchos	29.59	1.00e-17	82.40
IUUC-Aca-004644	Anolis carolinensis	30.43	3.00e-22	97.10
IUUC-Aly-006125	Arabidopsis lyrata	28.35	8.00e-09	52.00
IUUC-Ath-007338	Arabidopsis thaliana	26.53	1.00e-14	71.60
IUUC-Ago-007769	Ashbya gossypii	29.58	9.00e-06	42.40
IUUC-Afu-008924	Aspergillus fumigatus	32.35	2.00e-05	43.50
IUUC-Ate-010373	Aspergillus terreus	34.78	8.00e-06	44.30
IUUC-Ame-011453	Astyanax mexicanus	35.09	8.00e-25	105.00
IUUC-Bgr-012151	Blumeria graminis	32.84	7.00e-07	48.10
IUUC-Bta-013272	Bos taurus	34.34	1.00e-22	98.60
IUUC-Bci-013967	Botrytis cinerea	36.51	1.00e-05	44.30
IUUC-Bdi-014259	Brachypodium distachyon	30.34	8.00e-14	68.60
IUUC-Bol-016605	Brassica oleracea	31.18	8.00e-16	75.50
IUUC-Bra-016782	Brassica rapa	28.22	2.00e-17	81.60
IUUC-Cja-019253	Callithrix jacchus	34.94	1.00e-22	98.60
IUUC-Cfa-020844	Canis familiaris	34.94	2.00e-22	99.80
IUUC-Cpo-021645	Cavia porcellus	33.73	1.00e-21	95.10
IUUC-Csa-024012	Chlorocebus sabaeus	34.94	8.00e-23	99.40
IUUC-Cho-024304	Choloepus hoffmanni	45.24	8.00e-15	72.40
IUUC-Cin-025256	Ciona intestinalis	37.84	5.00e-18	83.60
IUUC-Cne-026993	Cryptococcus neoformans	45.45	1.00e-05	44.30
IUUC-Dre-028166	Danio rerio	34.13	1.00e-23	102.00
IUUC-Dno-029494	Dasypus novemcinctus	34.94	7.00e-23	99.40
IUUC-Dor-030259	Dipodomys ordii	33.73	3.00e-22	97.80
IUUC-Dse-031271	Dothistroma septosporum	53.57	8.00e-06	44.70
IUUC-Ete-032614	Echinops telfairi	28.31	1.00e-14	72.00
IUUC-Eca-033557	Equus caballus	34.46	4.00e-21	93.60
IUUC-Fca-035812	Felis catus	34.94	1.00e-22	98.20
IUUC-Fal-036654	Ficedula albicollis	32.64	5.00e-21	93.60
IUUC-Fso-038372	Fusarium solani	34.78	3.00e-06	45.80
IUUC-Gmo-039635	Gadus morhua	32.48	1.00e-20	92.00
IUUC-Ggr-039833	Gaeumannomyces graminis	36.00	5.00e-06	44.70
IUUC-Gga-040345	Gallus gallus	30.59	2.00e-20	90.90
IUUC-Gac-041668	Gasterosteus aculeatus	31.84	7.00e-22	95.90
IUUC-Gma-043890	Glycine max	28.07	1.00e-14	71.20
IUUC-Ggo-045000	Gorilla gorilla	34.94	8.00e-23	99.40
IUUC-Hsa-046691	Homo sapiens	34.94	1.00e-22	99.00
IUUC-Hvu-047464	Hordeum vulgare	30.56	2.00e-14	70.90
IUUC-Itr-048988	Ictidomys tridecemlineatus	33.13	6.00e-21	92.80
IUUC-Lch-049846	Latimeria chalumnae	33.33	5.00e-18	82.80
IUUC-Loc-051785	Lepisosteus oculatus	34.93	6.00e-31	126.00
IUUC-Lma-053242	Leptosphaeria maculans	33.75	1.00e-06	47.80
IUUC-Laf-054542	Loxodonta africana	36.75	2.00e-23	100.00
IUUC-Mcc-055234	Macaca mulatta	34.94	8.00e-23	99.40
IUUC-Meu-056544	Macropus eugenii	20.42	1.10e-02	32.30
IUUC-Mor-057233	Magnaporthe oryzae	32.31	2.00e-06	46.20
IUUC-Mpo-057316	Magnaporthe poae	37.25	3.00e-06	45.10
IUUC-Mtr-057996	Medicago truncatula	33.87	1.00e-14	71.60
IUUC-Mmr-060609	Microcebus murinus	33.73	4.00e-21	93.60
IUUC-Mdo-062853	Monodelphis domestica	33.13	8.00e-22	95.90
IUUC-Mmu-064383	Mus musculus	37.06	3.00e-22	97.40
IUUC-Mac-065250	Musa acuminata	29.25	2.00e-16	77.40
IUUC-Mlu-067410	Myotis lucifugus	35.54	5.00e-23	99.80
IUUC-Nle-069537	Nomascus leucogenys	37.06	4.00e-22	95.90
IUUC-Opr-070637	Ochotona princeps	31.67	4.00e-11	60.80
IUUC-Ont-071800	Oreochromis niloticus	33.53	1.00e-21	95.50
IUUC-Oan-073190	Ornithorhynchus anatinus	35.42	3.00e-21	94.40
IUUC-Ocu-073899	Oryctolagus cuniculus	35.54	9.00e-23	99.00
IUUC-Obr-076075	Oryza brachyantha	29.79	2.00e-15	73.90
IUUC-Oin-079850	Oryza indica	29.86	3.00e-14	70.10
IUUC-Ome-081191	Oryza meridionalis	29.86	2.00e-14	70.90
IUUC-Oni-082886	Oryza nivara	29.86	4.00e-14	69.70
IUUC-Osa-085833	Oryza sativa	29.17	8.00e-14	68.60
IUUC-Ola-086372	Oryzias latipes	32.37	1.00e-21	95.10
IUUC-Oga-087988	Otolemur garnettii	34.94	1.00e-22	98.60
IUUC-Oar-089976	Ovis aries	34.34	1.00e-22	98.60
IUUC-Ptr-091377	Pan troglodytes	34.34	1.00e-22	98.60
IUUC-Pan-092348	Papio anubis	34.94	1.00e-22	98.60
IUUC-Psi-092982	Pelodiscus sinensis	30.77	3.00e-19	87.40
IUUC-Pno-095113	Phaeosphaeria nodorum	35.94	1.00e-06	47.00
IUUC-Ppa-095627	Physcomitrella patens	28.47	5.00e-14	70.10
IUUC-Pfo-096366	Poecilia formosa	32.37	8.00e-22	95.90
IUUC-Pab-098242	Pongo abelii	34.94	1.00e-22	98.20
IUUC-Pop-099776	Populus trichocarpa	26.57	5.00e-13	65.90
IUUC-Pva-102627	Pteropus vampyrus	35.54	2.00e-24	105.00
IUUC-Ptt-103845	Puccinia triticina	50.00	6.00e-06	45.10
IUUC-Pte-104025	Pyrenophora teres	36.62	3.00e-07	49.30
IUUC-Pyt-104699	Pyrenophora triticirepentis	36.62	4.00e-07	48.90
IUUC-Rno-105344	Rattus norvegicus	33.73	5.00e-22	96.30
IUUC-Sce-106439	Saccharomyces cerevisiae	40.00	4.00e-08	50.40
IUUC-Sha-107420	Sarcophilus harrisii	37.50	2.00e-22	98.20
IUUC-Ssl-108567	Sclerotinia sclerotiorum	36.51	1.00e-05	43.90
IUUC-Smo-109218	Selaginella moellendorffii	29.17	4.00e-15	73.20
IUUC-Sly-111507	Solanum lycopersicum	26.06	6.00e-10	56.20
IUUC-Stu-112127	Solanum tuberosum	27.78	2.00e-10	57.40
IUUC-Sar-113762	Sorex araneus	35.54	2.00e-23	100.00
IUUC-Sbi-113997	Sorghum bicolor	31.29	6.00e-13	65.90
IUUC-Sre-115103	Sporisorium reilianum	42.86	1.00e-06	47.40
IUUC-Tgu-116969	Taeniopygia guttata	32.64	2.00e-21	94.40
IUUC-Tru-118414	Takifugu rubripes	31.11	5.00e-21	93.20
IUUC-Tsy-119312	Tarsius syrichta	34.34	2.00e-22	97.80
IUUC-Tni-120687	Tetraodon nigroviridis	36.05	8.00e-22	95.90
IUUC-Tca-121055	Theobroma cacao	26.80	7.00e-14	69.30
IUUC-Tae-124956	Triticum aestivum	30.56	2.00e-14	70.90
IUUC-Tur-126558	Triticum urartu	30.33	4.00e-10	56.20
IUUC-Tbe-127751	Tupaia belangeri	28.67	1.00e-12	65.90
IUUC-Ttr-128731	Tursiops truncatus	28.92	3.00e-15	74.30
IUUC-Uma-129360	Ustilago maydis	42.86	2.00e-06	47.00
IUUC-Vpa-130187	Vicugna pacos	33.73	2.00e-20	91.30
IUUC-Vvi-131393	Vitis vinifera	28.09	5.00e-15	72.80
IUUC-Xtr-132512	Xenopus tropicalis	34.01	3.00e-21	94.00
IUUC-Xma-133203	Xiphophorus maculatus	32.37	7.00e-22	95.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence